Pannonibacter phragmitetus: APZ00_14440
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Entry
APZ00_14440 CDS
T04214
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr03420
Nucleotide excision repair
pphr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
APZ00_14440
03430 Mismatch repair
APZ00_14440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphr03400
]
APZ00_14440
Enzymes [BR:
pphr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APZ00_14440
DNA repair and recombination proteins [BR:
pphr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
APZ00_14440
MMR (mismatch excision repair)
Other MMR factors
APZ00_14440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
AAA_11
PcrA_UvrD_tudor
DUF3553
Motif
Other DBs
NCBI-ProteinID:
ALV28110
UniProt:
A0A0U3FPI6
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All DBs
Position
3146327..3148807
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AA seq
826 aa
AA seq
DB search
MTVPPGFSDDWSDIDAEYDAGSGPGSAPVAAHRPQGGGIAARALAARQGAGQQGGAPEYF
EGLNPEQRLAVESADGPVLVLAGAGTGKTRVLTTRIAHILASGRAYPSQILAVTFTNKAA
REMKERIARYVGEGVEGMAWLGTFHSICVKILRRHAELVGLKSSFTILDTDDQLRLMKQV
IQAEGLDEKRWTARMFAAQVDSWKNRGLTPKDIPEGEARSFGNGKGRKLYEEYQDRLSVL
NAADFGDLLLHCITLFKTQPDVLKDFQRRFRYMLVDEYQDTNVAQYLWLRLLAQGNANIC
CVGDDDQSIYGWRGAEVDNILRFEHDFPGALVIRLERNYRSTAHILGAASHLIAHNEGRL
GKTLFTDDKDPEAEAVTVASAWDSEEEARSIGDEIEALQGKGHSLNQIAILVRASFQMRE
FEDRFITLGLNYRVIGGPRFYERLEIRDAMAYFRCVVQPADDLAFERIVNTPKRGLGEAT
LKIVHELARAQRIPLIEAATQLCRTEEIKPKARKALTDLLADLDRWRAQLTRVKHSELAE
IILDESGYTAMWRQDKSAEAPGRLDNLKELIRSMEEFESLPGFLEHIALVMDRDSADAAD
AVSIMTLHSAKGLEFDTVFLPGWEEGLFPHQRALDDGGRAGLEEERRLAYVGITRARQRA
KIWFASNRRIHGSWQSSIPSRFLDELPEDHVEVVESSSRYGGYSGGGYGGGNSYGVSRFD
SRDAFQNTYSTPGWQRAQKARAGGEDYGRRGDMRSARSRAQGPLTIEGELVARSVADKPS
EFEIGERVFHIKFGYGAIRAIEGNKLTIDFEKAGEKRVIDSFVERH
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgcctcccggtttttccgacgactggagcgatattgacgctgagtatgatgcc
gggtctgggccgggatctgcgcctgttgcggcccacaggccgcagggcggcggcattgcg
gcgcgggctctggcggcgcggcagggggctggccagcagggcggggcgccggaatatttc
gaagggctcaacccggaacagcggctggcagtcgaaagcgccgatggcccggttctggtg
ctggcaggagctggcaccggcaagacccgggttctgaccacccgcatcgcgcatattctg
gcaagcggccgggcctatccctcgcagatccttgcggtgaccttcaccaacaaggcggcg
cgcgagatgaaggagcgcatcgcccgttacgtgggtgagggcgtggagggcatggcgtgg
ctcggcacgttccactccatctgcgtgaagatcctgcgccgccatgcggagctggtgggc
ctgaagagcagcttcaccattctcgacactgacgatcagttgcgcctgatgaaacaggtg
attcaggccgagggtctggatgagaaacgctggaccgcacgcatgtttgccgcgcaggtg
gacagctggaagaaccgtggcctgacgcccaaggacattccggaaggcgaggcgcgctcc
ttcggcaatggcaaggggcgcaagctttacgaggagtatcaggaccggctgtccgtgctc
aatgctgcggatttcggcgacctgctgctccactgcatcaccctgttcaagacgcagccg
gatgtgctgaaggatttccagcgccgcttccgctacatgctggtggatgagtatcaggac
accaacgtcgcccagtatctgtggctgcggctgctggcgcagggcaatgccaatatctgc
tgcgtgggtgacgacgaccagtcgatctatggctggcgcggcgcggaggtggacaacatc
ctgcgcttcgagcacgatttccccggcgcgctcgtcatccggctggagcggaactaccgc
tccacggctcatattctcggcgcggcctcgcatctgatcgcccacaacgaggggcggctt
ggcaagacgctcttcaccgatgacaaggatccggaagctgaagccgttacggtcgcctcc
gcctgggattcggaggaagaagcgcgctccatcggcgatgaaatcgaggcgcttcagggc
aaggggcattcgctcaaccagatcgccattctggtgcgcgcgtccttccagatgcgtgag
tttgaagaccgcttcatcacgctggggctgaattaccgggtcatcggcggcccgcgcttc
tatgagcggctcgaaatccgcgatgccatggcctatttccgctgcgtggtgcagccggcc
gatgatctggcgttcgagcgcatcgtcaatacgcccaagcgcggcctcggcgaggcgacg
ctgaagatcgtgcatgaactggcccgggcgcagcgcattccgctgatcgaggcggcaacg
cagctgtgccgcacggaagaaatcaagcccaaggcgcgcaaggcgctcacggatctgctg
gcggatctggaccgctggcgggcgcagctcacccgcgtcaagcattccgaactggcggaa
atcattctggacgagagcggctacacggccatgtggcggcaggacaagtccgccgaggcg
ccgggccggctcgacaacctcaaggaactcatccgttccatggaagagttcgaatccctg
ccggggttcctcgagcatatcgccctcgtcatggaccgggattcggctgacgcggccgat
gccgtctcgatcatgacgctgcattcggccaaggggctggagttcgacacggtgttcctg
ccgggctgggaagaggggctcttcccgcaccagcgggcactggatgatggcggccgcgcc
gggctggaggaagagcggcggcttgcctatgtgggaatcacccgggcacggcagcgggcc
aagatctggttcgcctccaaccggcgcatccatggctcctggcagtcgagcattccctcg
cggtttctcgatgagctgccggaggatcatgtggaggtggtcgaaagctccagccgctat
ggcggctacagcggcggcggctatggcggcggcaacagctacggcgtgtcacgcttcgac
agccgcgatgccttccagaacacctattcgacgccgggctggcagcgggcgcagaaggcg
cgggcgggcggcgaggattacgggcggcgcggagacatgcgctctgcccgcagccgggcg
caagggccgctgaccatcgagggcgaactggtggcccgctccgtggcggacaagccctcg
gagttcgagatcggtgaacgggtgttccacatcaagttcggctatggcgcgatccgggcc
atcgagggcaacaagctgaccatcgacttcgagaaggccggcgagaagcgggtgatcgac
agtttcgtcgagcggcattga
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