KEGG   Pannonibacter phragmitetus: APZ00_14795
Entry
APZ00_14795       CDS       T04214                                 
Name
(GenBank) dicarboxylate--CoA ligase PimA
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
pphr  Pannonibacter phragmitetus
Pathway
pphr00061  Fatty acid biosynthesis
pphr00071  Fatty acid degradation
pphr01100  Metabolic pathways
pphr01212  Fatty acid metabolism
pphr02024  Quorum sensing
pphr04146  Peroxisome
Module
pphr_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:pphr00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    APZ00_14795
   00071 Fatty acid degradation
    APZ00_14795
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    APZ00_14795
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    APZ00_14795
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:pphr01004]
    APZ00_14795
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pphr04147]
    APZ00_14795
Enzymes [BR:pphr01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     APZ00_14795
Lipid biosynthesis proteins [BR:pphr01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   APZ00_14795
Exosome [BR:pphr04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   APZ00_14795
  Exosomal proteins of breast cancer cells
   APZ00_14795
SSDB
Motif
Pfam: AMP-binding AMP-binding_C AMP-binding_C_2
Other DBs
NCBI-ProteinID: ALV30121
UniProt: A0A0U3QC85
LinkDB
Position
3224539..3226212
AA seq 557 aa
MAKVEEWVAAFRPRPLHEYLEETVAACGRSPAVDFLGKTWTYGELGALVNRVAAGLQALG
VTKGTKVGLCLPNTPYYTVFYFALMKAGATVVNFNPLYVEREIAFQARDAEVRIMVTLDL
KVIYDKVEAVRKDGILDRLIVCPMADILPAVKRALFTLFKGKDRAAWKADSGHVPYAALL
NRGANPVPVAIDPAEDVAVLQYTGGTTGVPKGAMLTHANLSANIEQMKDIFHAAEKGKER
MLCVIPFFHVFAMTVAQNLAVVLAAQMVLMPRFDMKLLLDTIKRTRPTLFPGVPTIYTAI
NNSPLTVSYDLTSVKLCISGGAPLPVEVKEKFETITGCILVEGYGLTETSPVVSCNPLDE
RRRAGSIGQLAPGTLAEFRALDDLSSTVPQGEKGELVVKGPQVMKGYWKRPEETARTIEN
GFLHTGDVGYADKDGFIYLVDRIKDLILCSGYNVYPRVIEEALYQHAGVEEAIVIAVPDE
YRGQAPKAFVKLRAGATVTQEEMRAFLKDHLSAIELPREIEFRDALPKTMVGKLSKKELV
EEEAAKRAAAAANQPAA
NT seq 1674 nt   +upstreamnt  +downstreamnt
atggcgaaagtggaggaatgggtcgcggctttcaggccccgcccgctgcatgaatatctg
gaggaaaccgtcgcagcctgtggcaggagcccggctgtcgactttctcggcaagacctgg
acctatggtgagctcggtgccctggtgaaccgcgttgccgcaggcctgcaggcactgggg
gtcaccaaaggcacgaaggttggcctgtgcctgcccaacacgccttactacacagtcttc
tacttcgcgctgatgaaggccggggcaacggtcgtcaatttcaacccgctttatgtggag
cgcgagatcgcctttcaggcgcgggatgcggaagtgcgcatcatggtcacgctcgacctc
aaggtcatctatgacaaggtcgaggcggtgcgcaaggatggcatcctggacaggctcatc
gtttgcccgatggccgatatcctgcctgcggtgaagcgggcgctgttcaccctgttcaag
ggcaaggaccgggccgcctggaaggcggacagcggccacgtgccctatgcggccctgctg
aaccggggcgccaatccggtaccggtcgccatcgatccggccgaggacgtggcggtgctg
caatataccggcggcaccaccggcgtgccaaagggtgcgatgctgacgcatgcgaatctg
tccgccaacatcgagcagatgaaggacattttccatgcggcggagaagggcaaggagcgg
atgctctgcgtcattcccttcttccacgtctttgccatgaccgtggcgcagaaccttgcc
gtcgtgctggccgcccagatggttctgatgccgcgcttcgacatgaagctgctgctggat
accatcaagcgcacccgtccgacgctgttcccgggcgtcccgacgatctacacggcaatc
aacaactcaccgctcaccgtctcctatgacctgaccagcgtgaagctgtgcatctccggc
ggcgcgccgctgccggtggaggtgaaggagaagttcgagacgattaccggctgtatcctc
gtggaaggctacggactgacggaaacctcgccggttgtctcatgcaatcccctggacgag
cgccgacgcgccggttccatcggccagttggcccccggcacgctggcggaattccgggcg
ctggacgatctctccagcactgtgccgcagggcgagaagggggaactggtggtcaagggg
ccgcaggtgatgaagggctactggaagcggcccgaggaaaccgcccgcaccatcgagaac
ggcttcctgcacaccggcgacgtgggctatgccgacaaggacggcttcatctatctggtg
gaccggatcaaggacctcatcctctgctcgggctacaacgtctatccgcgcgtgatcgag
gaagccctgtatcagcacgcaggtgttgaggaggccatcgtgatcgcggttccggacgag
taccgaggacaggcgcccaaggccttcgtcaagctgcgggccggtgccacggtcacgcag
gaggaaatgcgcgccttcctcaaggatcacctctctgccattgagttgccgcgcgagatc
gagttccgtgatgcgctgcccaagaccatggtgggcaagctgtccaagaaggaactggtc
gaggaagaagctgccaagcgggctgcggctgctgccaatcagccggccgcctga

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