Pannonibacter phragmitetus: APZ00_15905
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Entry
APZ00_15905 CDS
T04214
Name
(GenBank) methylase
KO
K26273
protein strawberry notch
Organism
pphr
Pannonibacter phragmitetus
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pphr03036
]
APZ00_15905
Chromosome and associated proteins [BR:
pphr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
APZ00_15905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
DEAD
Motif
Other DBs
NCBI-ProteinID:
ALV28366
UniProt:
A0A0U3FQ57
LinkDB
All DBs
Position
complement(3471824..3476167)
Genome browser
AA seq
1447 aa
AA seq
DB search
MNMISASAAASAAAPLPLAPDLDISASVFTAAGLLLPHLERGQRIDAATLRAAMESAFGA
SDATGAWNWKTAYEACEAATVLFLRKYGSALFRKAASPAARLSALTKIADLLPTHTRRSE
EAQTFQQFSTPIPLGLIAANAAAITQADRVLEPSAGTGLLAILAEIAGGSLILNELADMR
AGLLSSLFPAVSVTRFDAAQIDDHLDPAVTPSVVLMNPPFSVMANVDGRVADAAFRHIAS
ALARLAPAGRLVTITGASFAPDSPAWSSAFARLQERGRIVFSAAIDGSVYAKHGTTIDTR
LTVIDKLPAEEPNVFPASPGVASDTATLMGWLDEHLPARLPIDPSFTVRVAAASTPRSVR
GYLNRAPRSAPTAPMAEPEGLPLAYETIDWQAGEAGRLSDSIYEEYGLQAIRLSGSQAHP
TKLVQSAAMASVAPPKPSYRPQLPANVHELLSDAQLETVIYAGEAHSDYLAGSWTIDETF
DVVTAAREDARDAVRFRRGFFIGDGTGVGKGRQSAAIILDNWLQGRRRAVWISKSDKLLE
DAQRDWSALGMERLLVTPLSRFPQGKPVALPEGVLFTTYATLRSDDRGERVSRVKQIVEW
LGSDFDGVIIFDEAHSMQNAAGGKGERGDVAASQQGRAGLRLQHALPNARIVYVSATGAT
TVHNLAYAQRLGLWGGEDFPFSTRAEFVEAIEAGGVAAMEVLARDLRALGLYTARSLSFD
GVEYELVEHELTPEQTRIYDAYAGAFAVIHNNLDAAIEAANVTGSSGTLNKQAKSAARSA
FESAKQRFFGHLLTSMKTPTLIRSISADLDAGHAAVIQIVSTGEALMERRLAELPTEEWN
DVRVDITPREYVLDYLAHSFPVQLYEPFTDSEGNMSSRPVYRDGQPVESREAVARRNALI
EKLASLPPVPGALDQIVQHFGTDTVAEVTGRSRRIIRKISPGGVDRLAVENRAAAANLAE
TQAFMDDQKRILIFSDAGGTGRSYHAELSARNTRLRVHYLLEPGWKADAAIQGLGRTHRT
NQAQPPLFRPIATDVKAEKRFLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESHYAR
DALRQLYLLLVRGKVEGCSLDRFEAATGLKLMDSTGIKDDLPGITTFLNRMLALTIELQG
ILFTAFEQLLNAKIEGAIASGTYDVGLETLTAERFTVTDRQTIYTHPGTGAQTQLLTILE
RERNRPVTLDAALEQLDDPRAKLLINERSGRAAVQIPTTSVMLDDGEIERRVRLIRPMEA
HNVPIKMMGDTHWVEAERDPFAEVWNAEIADVPEYSDSTIYIVTGLLLPIWKRLPTDSTR
VYRLQTDEGERIVGRKVSPAWAANATTTGTSSLAPDDAFTALLDGRTILDLAEGLQLRRS
RVMGVNRIELTGFDDTMRERLSAYGLFHEIISWKLRMFVPVDDNGPVVLTKLLDRFPVQR
VGEREAA
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgatttccgcatccgcagcggcatcggctgccgcaccccttccgctcgccccc
gacctcgacatctccgcttcggtttttaccgcggcggggctcctgctccctcatctcgaa
cgcggccagcgcatcgacgccgctacgctgcgcgcagcgatggaaagcgccttcggagca
tccgacgccaccggcgcctggaattggaaaacggcatacgaggcttgcgaggccgcaacc
gtcctcttcctgcgcaaatacgggtcggcgcttttccgcaaagccgcgtctccggctgca
cggctttccgccttgaccaaaatcgccgaccttctgccgacgcatacccgccgctcagag
gaagcccagaccttccagcaattctcgacgccgatcccgctcggcctgatcgcggcgaac
gcagccgccatcacccaagccgaccgcgttctggagccttcggccggcacgggactgctc
gccattctggccgagatcgctggaggctcgctgatcctcaacgaactcgccgacatgcgc
gccggtcttctctcttccctctttccggccgtttccgtcacgcgtttcgacgcggcccag
atcgacgaccatctcgatccggccgtgaccccgagcgtggtgctgatgaacccgccgttt
tcggtgatggccaatgtcgatggccgcgtcgctgacgccgcattccgccatatcgcctcg
gcgctggcgcgtctcgctcccgccggccgtctcgtcaccatcaccggcgccagcttcgcg
cccgacagtccggcctggtcttcggccttcgcccgtctgcaggagcgcggccgcatcgtg
ttctccgccgcgatcgacggctcggtctatgccaaacatggcacgacgatcgacacgcgc
ctgaccgtcatcgacaagctgcccgccgaagagcctaacgtctttccggcttcccccggc
gtcgcctccgacaccgccacgctgatgggctggcttgacgagcatctgcccgcgcggctc
cccatcgatccgtccttcacagtccgtgttgcagccgcatccacaccccgcagcgtgcgc
ggctatctgaaccgtgcccccagatcggcaccgaccgcccccatggccgagccggaaggc
ctcccgctcgcctatgaaacgatcgactggcaggcaggcgaagccgggcgcctctcggat
tcgatctatgaagaatacggtcttcaggcgatccggctttccggctctcaggcgcatccg
accaagctcgtgcagtcggcagccatggccagcgtcgcaccgccgaagccgagctatcgg
ccgcagcttccggccaatgtccatgagctactctccgacgcacagcttgagaccgtgatc
tatgccggcgaggcgcattccgactatctcgccgggtcctggaccatcgacgagactttc
gacgtcgtcaccgccgcgcgcgaggacgcgagagacgccgttcgctttcggcgcggcttc
ttcatcggtgacggcaccggcgtcggcaagggccgtcagtccgccgccatcatcctggac
aactggctgcaaggtcgccgcagggcggtgtggatctcgaagtccgacaagctgctcgag
gatgcccagcgcgactggtctgccctcggcatggaacgcctgctggtcacgccgctgtcg
cgcttcccgcagggcaagccggtcgcacttccggaaggcgtcctatttacgacctatgcc
acgctacgctccgacgaccgtggcgagagggtttcgcgcgtcaagcagatcgtcgaatgg
ttgggctccgatttcgatggagtgatcattttcgacgaggcgcattcgatgcagaacgcc
gctggcggcaagggagaacgtggtgatgtcgccgcctcgcagcagggccgtgccggcctg
cgccttcagcatgcgctaccgaatgcccgcatcgtctatgtctcagccaccggcgcgacc
acggtccacaatctcgcctatgcccagcggctcggcctttggggcggtgaggacttcccc
ttctcgacgcgcgccgaattcgtcgaggcgatcgaggccggcggtgtcgccgccatggag
gtcctggcacgcgatcttcgcgcgctcggtctctataccgcccgctcgctctccttcgac
ggggttgaatatgagctggtcgagcacgagctgacgcccgagcagacccgcatctacgac
gcctatgccggcgccttcgccgtcatccataacaatctcgacgcggccatagaggcggcc
aacgtcaccggttcctccggcacgctgaacaagcaggcgaagtccgccgcccgttccgcc
ttcgagagcgccaagcagcggttcttcggccaccttctgaccagcatgaagacaccgacg
ctgatccgctcaatctcggctgatctcgacgcgggccacgcggccgtcattcagattgtc
tccaccggcgaggcgctgatggagcggcgactggccgagcttccgactgaggaatggaac
gacgtccgcgttgacatcacgccgagggaatatgtgctcgactacctggctcattccttc
ccggtgcagctctatgaacccttcaccgatagcgagggcaacatgtcgtcgcgccccgtc
tatcgtgatggccagccggtcgaaagccgggaggctgtcgcccgccgcaatgcgctgatc
gaaaaactcgccagcctgccgcccgtgccgggcgcgctcgaccagatcgtccagcatttc
gggaccgatacggtggccgaggtcacaggccgatcgcggcggatcatccgcaagatcagt
ccgggcggcgttgatcgcctcgccgtcgagaaccgcgcagcggctgccaatctcgccgag
acgcaagccttcatggatgaccagaagcgcatcctgatcttctcggatgcgggcggcacc
ggccgcagctaccacgccgaactgtcggcgcggaacacgcggctgcgcgtccactatctg
ctcgaacccggctggaaggcggacgctgccattcaggggctcggccgaacgcatcgcacg
aaccaggcgcagccgcccctgttccgcccgatcgcaaccgatgtgaaggccgagaagcgc
ttcctctcgaccatcgcccgccgccttgacacactgggcgcgatcacacgcggccagcgc
cagaccggcggccagggcctgttccggcccgaggacaatctggaatcccactacgcccgc
gatgcgctgcgtcagctctatctccttctcgtgcgcggcaaggtcgaaggctgctcgctc
gaccgtttcgaagccgccaccggactgaagctgatggattccaccggcatcaaggacgat
ctgcccggcatcacgaccttcctcaatcgtatgctggcgctcaccatcgagcttcagggc
attctcttcaccgcttttgagcagttgctgaacgcgaagatcgagggcgctattgcatcc
ggcacctatgatgtcgggctggagacgctgacggctgaacgctttaccgttaccgaccgg
cagaccatctacacgcatccgggaaccggcgcgcaaacgcaattgctcaccatcctcgag
cgcgagcgcaaccgtccggtcacactcgacgcggctttggagcagctcgacgatccccgc
gcgaagctcctgatcaatgagcgatccgggcgcgccgccgttcagatcccgaccaccagc
gtcatgctcgacgatggcgagatcgagcgtcgtgtccggctgatccggccgatggaggcg
cacaatgtcccgatcaagatgatgggcgacacccactgggtcgaagcggaacgcgatccc
ttcgcagaagtctggaatgccgagatcgcggacgttccggaatattccgacagtaccatc
tacatcgttaccggcctcttgttgccgatctggaaacggttgcccaccgactccacccgc
gtctatcggctccagaccgatgagggcgagcggatcgtcggccgcaaggtctcgccagcc
tgggccgccaacgcaaccacgaccgggacatcttcgctcgcgccggacgatgccttcaca
gcactgctcgacggccggacgatcctcgatcttgccgaggggctacagcttcgccgcagc
cgcgtcatgggtgtgaaccgtatcgagctgacgggcttcgacgacacgatgcgcgagcgt
ctgtcagcctatggcctcttccacgagatcatctcctggaagctgcgcatgtttgtgccc
gttgacgacaacggcccggttgtcctcacaaagttgctcgaccggtttccggtccagcgc
gtcggtgagcgggaggctgcgtaa
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