Pannonibacter phragmitetus: APZ00_17405
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Entry
APZ00_17405 CDS
T04214
Name
(GenBank) tyrosine--tRNA ligase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
APZ00_17405
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pphr01007
]
APZ00_17405
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pphr03016
]
APZ00_17405
03029 Mitochondrial biogenesis [BR:
pphr03029
]
APZ00_17405
Enzymes [BR:
pphr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
APZ00_17405
Amino acid related enzymes [BR:
pphr01007
]
Aminoacyl-tRNA synthetase
Class I (A)
APZ00_17405
Transfer RNA biogenesis [BR:
pphr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
APZ00_17405
Prokaryotic type
APZ00_17405
Mitochondrial biogenesis [BR:
pphr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
APZ00_17405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
SYY_C-terminal
S4
Motif
Other DBs
NCBI-ProteinID:
ALV28619
UniProt:
A0A0U3NB68
LinkDB
All DBs
Position
complement(3801167..3802420)
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AA seq
417 aa
AA seq
DB search
MSEYKSGFLKVLNERGFIHQMSDAEGLDKLLSTETVTAYIGFDCTAPSLHAGSLVTIMML
YWLQQTGHRPIALMGSGTTRVGDPTGKDESRKILSDDDIETNKAGIRKIFDKLLTFGDGP
KDAIMLDNADWLMKLNYVEFLRDIGRHFSVNQMIQRDSVRLRLEREQHLSFLEFNYMLLQ
GYDYLEIYQQTGCRLQMGGSDQWSNILSGVDLVRRKAGVEAFALTAPLLTTASGAKMGKT
AAGAVWLNADQLSPYDYWQYWRNTEDADVERFMKLFTVLPLDEIARLAALQGAEINEAKK
ILATEATAMIHGREAAEAAAETARRAFEEGQTAEGLPTVELPKAELEAGLGVLDAFRLAG
LCASNGEARRNITGGALKVNDEAVTDDKRSLSMADITGEGVIKLSMGKKKHVLLRPA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtacaagtccggttttctgaaggtcctcaacgagcgcggcttcattcaccag
atgtccgacgcagagggcctcgacaagctgctctcgaccgagaccgtgaccgcctatatc
ggctttgactgcacggcgccgagcctccatgccggttcgctcgtcaccatcatgatgctc
tactggctgcagcagacaggtcaccggccgatcgcgctgatggggtctggcaccacccgc
gtcggcgacccgaccggcaaggacgaaagccgcaagatcctgtccgatgacgacatcgag
accaacaaggccggcatccgcaagatcttcgacaagctgctcaccttcggcgacggcccg
aaggatgccatcatgctggacaatgccgactggctgatgaagttgaactatgtggagttc
ctgcgcgatatcggccgccatttctcggtcaaccagatgatccagcgcgacagcgtgcgt
ctgcggctggagcgcgagcagcacctgtccttcctggaattcaactacatgctgctgcag
ggctacgactatctggagatctaccagcagaccggctgccgcctgcagatgggcggctcc
gaccagtggtccaacattctctcaggcgtcgatctggttcgccgcaaggcaggcgtggag
gccttcgccctcaccgctcccctgctgaccaccgcctccggcgccaagatgggcaagacc
gccgcaggcgctgtctggctcaatgccgaccagctgtcgccctatgactactggcagtac
tggcgcaacaccgaggacgcagatgtggagcgcttcatgaagctcttcaccgtgctgccg
ctggacgagatcgcccgccttgccgccctgcagggcgcggagatcaacgaagccaagaag
atcctcgccaccgaagccaccgccatgatccatggccgcgaggctgcagaggccgctgcc
gaaaccgcccgccgcgcctttgaggaaggccagacggccgaaggcctgccgaccgtcgaa
ctgccgaaggcagagctggaagccggcctcggcgtgctggatgccttcaggcttgccggc
ctttgtgcctccaatggcgaagcccgccgcaacatcaccggcggcgcgctgaaggtgaat
gacgaggccgtcaccgatgacaagcgcagcctgtccatggcggacatcaccggcgaaggc
gtgatcaagctttccatgggcaagaaaaagcacgtgctgctgcgcccggcgtga
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