Pannonibacter phragmitetus: APZ00_18355
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Entry
APZ00_18355 CDS
T04214
Name
(GenBank) penicillin-binding protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr00550
Peptidoglycan biosynthesis
pphr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
APZ00_18355
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pphr01002
]
APZ00_18355
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pphr01011
]
APZ00_18355
Enzymes [BR:
pphr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
APZ00_18355
Peptidases and inhibitors [BR:
pphr01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
APZ00_18355
Peptidoglycan biosynthesis and degradation proteins [BR:
pphr01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
APZ00_18355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
ALV30211
UniProt:
A0A0U3PN57
LinkDB
All DBs
Position
complement(4013453..4014562)
Genome browser
AA seq
369 aa
AA seq
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MPHPAAAQDVLATRAATAILLDQSSDTLLYAKAPDQPFEPGSLAKVMTAAIVFDALKAGE
TSEDTLYTVSEHAWRTGGAPSRGATMFAAVKSQIAVSDLLQGLLVHNANDAAIVLAEGLA
GSEEAFAGRMNALAEKLGMKNTHFANPTGYPAPGVKVTARDLSLLAGYILSEHKERYGLF
SQPEFTWNNIFQRAKNPFLGNVTGLDGLGAGQTEKDGFSGLVSVERNGRRVIAALSGLPT
DKARLAALKDLVEGAWDAFTLNRLFDAGAQVASARVFGGTAGEVPLVAARTVEVLLPTGG
TMNYRLRAVYDGPLLAPVEKGTVVGEIRVLGPDDAVVYRAPLLTGGDVSEGTLSQRAMNG
VRQLLFGWL
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaccccgccgcggcgcaggatgtgctggcgacccgcgccgcgaccgccattctt
ctcgaccagtccagtgacacgctgctttatgccaaggcgccggaccagccgtttgagccg
ggctcccttgccaaggtgatgacggcggcgatcgtcttcgatgcgctgaaggcgggggaa
acgtccgaagacacgctttacacggtcagcgaacatgcctggcgcacaggcggagcgccg
tcgcgcggggcgacgatgtttgcggccgtgaagtcgcagatcgccgtgtccgacctgctg
caggggctcctcgttcacaatgccaatgatgcggccatcgttctggctgaaggacttgca
ggcagcgaggaggcctttgccgggcgcatgaacgctcttgctgaaaagctcggcatgaag
aacacgcattttgccaatccgaccggctatccggcgccgggtgtgaaagtgacggcgcgc
gatctcagtctgctggccggctatatcctgagcgagcacaaggagcgctacggcctgttc
agccagccggagttcacctggaacaacatcttccagcgggcgaagaacccgtttctgggc
aatgtcaccgggctggacgggctgggggcaggtcagaccgaaaaggatgggttcagcggt
cttgtttcggtggagcggaacgggcggcgggtgattgcggccctttccggccttcccacg
gacaaggcacggctggcggcgctgaaggatcttgtcgagggggcatgggatgccttcacc
ctcaaccgcctgtttgatgccggggcacaggtggccagcgcgcgcgtgttcggcggcacg
gcaggcgaggtgccgctggtggcggcgcgcactgtcgaggttctgttgcccacgggcggc
acgatgaactaccgtctgcgcgccgtttatgacgggccgctgcttgcgccggttgaaaag
ggcaccgtggtgggcgaaatcagggtgctggggccggatgatgccgtcgtttaccgcgca
ccgcttctgacgggcggtgacgtcagcgaaggcacgctgagccagcgggcgatgaatggt
gtgcgtcagctgctgtttggctggctgtga
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