Pannonibacter phragmitetus: APZ00_18630
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Entry
APZ00_18630 CDS
T04214
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pphr
Pannonibacter phragmitetus
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pphr03032
]
APZ00_18630
03400 DNA repair and recombination proteins [BR:
pphr03400
]
APZ00_18630
Enzymes [BR:
pphr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
APZ00_18630
DNA replication proteins [BR:
pphr03032
]
Prokaryotic type
DNA Topoisomerases
APZ00_18630
DNA repair and recombination proteins [BR:
pphr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
APZ00_18630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ALV28818
UniProt:
A0A0U3P7K2
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All DBs
Position
complement(4078233..4081043)
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AA seq
936 aa
AA seq
DB search
MADQDSSTPGASLPSDIRPVSITDEMKRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYS
MHENGYEWNKPYRKSARVVGDVMGKYHPHGDSAIYDALVRMAQGFSLRLPLIDGQGNFGS
VDGDPAAAMRYTECRLQKVAHTLLDDIDKDTVNFQENYDSSETEPVVLPAKFPNLLVNGA
GGIAVGMATNIPPHNLGEVIDGAIAVMENPALSLGELMEIIPGPDFPTGGTILGRSGIRS
AYETGRGSLVMRGKVEVEQLRAGREALIVTEIPYQVNKSTMIEKIAELVREKRIEGISDI
RDESDRLGMRVVIELKKDAVADVILNQLYRFSSLQQSFGCNMVALNGGRPELMTLMDMLK
AFVVFREEVIGRRTRFLLAKARDRAHVLVGLAIAVANIDEVIHLIRTAPDPATARALLMG
RDWPAKDMEPLVRLIDDPRHTVNADGSYRLSEEQARAILDLRLQRLTALGRDEIGDELNK
LGDEISDYLDILRSRARVQQIIRDELLAIRNDFATPRKTELVEGGADLEDEDLIQREDMV
VTVSHGGYIKRVPLATYRAQRRGGKGRSGMATKDEDFVTRLFVANTHTPVLFFSSRGIVY
KMKVWRLPLGGPTSRGKALINMLPLEPGEQISSIMPLPENEDTWGDLDVMFATTRGTVRR
NKLSDFTQINRSGKIAMKLEEGDGIVGVFTCTEHDDVMLTTAAGQCIRFPVSDVRVFAGR
NSVGVRGINLADDDRLISMTILRHFNATSEERAAYLKLRRLMRGEADDAGSEAVAEDGEE
AAAGELPQERYAEMSAAEQVILTVSENGYGKRTSSFEYRVTGRGGKGITAMAVNKRNGPL
IASFPVEDRDQIMLVTDGGQLIRCPVDGIRVAGRATQGVIVFNTAEDEKVVAVERVSEED
DSEEAVEGIAAEGTAGEGAGPEAGEDTGGEDTGGED
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
ttggccgatcaggattcaagtacgccgggcgcatccctgccgtccgacattcgccccgtc
tccatcacggatgagatgaagcgcagctatctcgattacgccatgagcgtgattgtcagc
cgcgcgcttccggacgtgagagacgggctcaagcctgttcaccggcgcatcctctattcg
atgcacgagaacggctacgaatggaacaagccctatcgcaagtcggcccgtgtggtcggt
gacgtgatgggtaaatatcacccgcatggtgacagcgcgatctatgacgccctcgtgcgc
atggcgcagggcttttccctgcgtctgccgctcatcgacgggcagggcaacttcggttcg
gtggacggcgacccggctgcggccatgcgctacaccgagtgccgtctgcagaaggttgcc
cacacgcttctggatgacatcgacaaggatacggtcaatttccaggagaactacgacagc
tccgagaccgagcctgtcgttctgccggcgaagttcccgaacctgctcgtcaatggcgca
ggcggcatcgccgtcggcatggccaccaacattccgccgcacaacctcggcgaagtgatc
gatggcgccattgccgtgatggaaaatccggcgctcagcctcggcgagctgatggagatc
atccccggcccggacttcccgaccggcggcacgatcctgggccgctccggcatccgctcg
gcctatgagacgggccgcggctcactggtcatgcgcggcaaggtcgaggtggagcagctg
cgcgccgggcgcgaggcgctgatcgtcaccgagatcccctatcaggtcaacaagtccacg
atgatcgagaagatcgccgaactggtgcgtgaaaagcgcatcgagggcatctccgacatc
cgcgacgaaagcgaccgtctgggcatgcgcgtggtgatcgagctgaagaaggatgccgtc
gccgacgtgatcctcaaccagctctaccgcttctcctcgctgcagcagagcttcggctgc
aacatggtggcgctgaacggcggccgccccgagctgatgacgctgatggacatgctgaag
gccttcgtcgtcttccgcgaggaagtcatcggccggcgcacccgcttcctgctggccaag
gcgcgtgaccgcgcccatgtgctggtgggccttgccatcgccgttgccaacatcgacgag
gtgatccacctcatccgcaccgcgccggacccggccaccgcccgcgccctgttgatgggc
cgcgactggccggccaaggatatggagccgctggtccgcctcatcgacgacccgcgccac
accgtcaacgccgacggcagctaccggctctccgaggaacaggcccgcgccatcctcgac
ctgcgcctgcagcgcctgaccgcccttggccgcgatgaaatcggcgacgagctgaacaag
ctcggcgacgagatttccgactatctggacatcctgcgctcccgcgcccgggtgcagcag
atcatccgcgacgaactgctggccatccgcaacgacttcgccaccccccgcaagacggag
ctggtggaaggcggcgcggatctggaggacgaagacctcatccagcgcgaggacatggtg
gtcaccgtcagccatggcggctacatcaagcgcgtgccgctggcgacctaccgcgcccag
cgccggggtggcaagggccgttcgggcatggcgacgaaggacgaggatttcgtcacccgc
ctgttcgtggccaacacccacacgccggtgctgttcttctcctcgcgcggcatcgtctac
aagatgaaggtctggcgcctgccgctgggcgggccgacctcgcgcggcaaggcgctgatc
aacatgctgccgctggaacccggcgagcagatctcctcgatcatgccgctgccggagaac
gaggacacctggggcgatctggacgtgatgttcgccacgacgcgcggcaccgtgcgccgg
aacaagctgtccgacttcacccagatcaaccgctccggcaagatcgccatgaagctggaa
gagggcgacggcatcgtcggcgtcttcacctgcaccgagcatgacgatgtgatgctgacg
acggcggccggccagtgcatccgcttccccgtgtccgatgtgcgcgtctttgcgggccgc
aattcggtcggcgtgcgcggcatcaatctggccgacgacgaccgtctgatctccatgacg
atcctgcgccacttcaacgccacctcggaagagcgtgccgcctatctgaagctccgccgc
ctgatgcgcggtgaggccgatgatgcgggcagcgaagccgtggccgaggatggcgaggaa
gccgccgccggcgaactgccgcaggagcgctacgcagaaatgagcgcggcggaacaggtg
atcctcaccgtctccgaaaacggctacggcaagcgcacctcgtccttcgagtaccgggtg
accggacgcggcggcaagggcatcaccgccatggcggtgaacaagcgcaacggcccgctg
attgcctccttccccgtcgaggaccgcgaccagatcatgctggtgaccgacggcggccag
ctgatccgttgcccggttgacggcatccgcgtcgccggccgcgccacccagggcgtcatc
gtcttcaacacggccgaggacgaaaaggtcgtcgccgtggaacgcgtcagcgaggaagac
gacagcgaagaggccgtggaaggcatcgccgctgagggtactgccggtgagggcgctggc
ccggaagctggcgaagacacgggtggtgaggacacaggcggcgaagactaa
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