Pannonibacter phragmitetus: APZ00_19145
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Entry
APZ00_19145 CDS
T04214
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pphr
Pannonibacter phragmitetus
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pphr01002
]
APZ00_19145
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pphr01011
]
APZ00_19145
Peptidases and inhibitors [BR:
pphr01002
]
Cysteine peptidases
Family C82
APZ00_19145
Peptidoglycan biosynthesis and degradation proteins [BR:
pphr01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
APZ00_19145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ALV28899
UniProt:
A0A0U3PJ27
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All DBs
Position
complement(4202542..4204560)
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AA seq
672 aa
AA seq
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MRHTLQPARFLSTLLASAAIASLTLTASVQPADAFLDRIFGGRPVDEPQPVQPAPAPVLD
KAVIAANKVSAPKYYTYKADQLAAFSLKALAVSPQPAAAQTAGGATSGETGTALTVSAQP
VAPQAVAPHSVADQTGSIASPAVQPEPAEDKAALAFDAARPAFAALSFKALPEVAKAVET
FYAQEPRFVWVENGAPGARFAALKSELERAGDFGLDPADYRVEAPALTGLEPAARDAALV
DFEVKASIAALTYVLDARRGRVDPNRISGYHDLPRHKVDLTAEAKGLAAAADAGQYLRSR
QLASPQFTALVEELARLKRETADTPQVVIAAGTLLKPGKSSPEVKNVVAAIRLRGSAALL
EAHKDLLDTYMGEELYSDAIAGLVKAYQAEAGLNADGVVGAGTIQALTGESNASKIAKVE
LALERMRWLPENLGERRVFINQPAFTVAYFEPGKAPLEMRAVIGKKSNQTNFFYDTIETV
EYNPYWGVPYSIIVNEKLSKLQQDPAWLDKAGYEVTTASGKPVSSASVDWHAVATGKMRV
NVRQRPGDDNALGELKILFPNKHAIYMHDTPSRSLFKKDMRAFSHGCVRLADPRAMAAAV
LGKTEAHVASRIATGKNNSEDVAGNIPVYIAYFTAWPQTDGSIGYFGDVYDRDAYLQKAL
EATRKARGTAES
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcatacgctgcagcccgcacgtttcctctccacacttctggcaagcgctgccatt
gcttccctcacgctgaccgccagcgttcagcctgccgatgcgtttctggaccggattttc
ggcgggcgccccgtggacgagccccagcctgttcagccggcaccggcgccggtgctggac
aaggccgtgatcgccgccaacaaggtctccgctccgaaatattacacgtacaaggccgat
caactggcggccttctctctgaaggcgctggccgtaagcccccagcccgcagcagctcaa
acggccggcggtgccacgtccggtgagactggcacagcgctgaccgtgtccgctcagccc
gttgcacctcaggccgttgcacctcattctgtggctgaccagaccggcagcatcgcttcg
ccggccgttcagccggagcccgccgaggataaggcggctctggcctttgacgcggcgcgt
ccggcctttgccgccctcagtttcaaggccttgccggaagtggccaaggcggtcgaaacg
ttctatgcgcaggagccgcgtttcgtctgggtcgaaaatggtgcgcccggtgcccggttc
gccgcgctgaagtccgagctggagcgggcgggggatttcgggttggatccggccgattac
cgggtcgaggcgcctgcgctcaccggccttgagccggccgcccgcgatgcggccctggtg
gattttgaggtgaaggcctccatcgcggcgctgacctatgtgctggacgcgcgccgtggc
cgggtcgatccgaaccgcatctccggctatcacgacctgccgcgccacaaggtggacctg
acggccgaggcgaaagggctggcggcggctgccgatgcgggacagtacctgcgctcgcgc
cagctggcatcgccccagttcaccgcgctggtggaagagctggcgcggctgaagcgcgag
accgccgataccccgcaggtggtgattgcggccggcacgctgctgaagccgggcaagtcc
agccccgaggtgaagaatgtggtcgccgccatccgcctgcgcggctctgcggcgctgctg
gaggcgcacaaggatctgctcgacacctatatgggcgaggagctttacagcgatgccatc
gccggtctggtcaaggcctatcaggccgaagccgggctcaatgccgatggcgtggtgggg
gcgggcaccatccaggcgctgacgggcgaaagcaatgcctcgaagatcgccaaggtggaa
ctggcgctggagcggatgcgctggctgccggagaatcttggcgagcgccgtgtcttcatc
aaccagccggccttcacggttgcttatttcgagccgggcaaggcgccgctggaaatgcgc
gcggtcatcggcaagaagtcgaaccagaccaacttcttctacgacaccatcgagacggtg
gaatacaacccctattggggcgtgccctattcgatcatcgtcaatgagaagctgtcgaag
ctgcagcaggatccggcgtggctcgacaaggccggttatgaggtgacgaccgcttccggc
aagccggtttcctcggccagcgtcgactggcatgcggtggcgaccggcaagatgcgggtc
aacgtgcgccagcgcccgggcgatgacaacgcgcttggcgagctgaagatcctcttcccc
aacaagcacgccatctacatgcatgacacgccgtcgcgctcgctgttcaagaaggacatg
cgcgccttcagccacggctgcgtgcgccttgccgacccgcgtgccatggccgccgccgtg
ctgggcaagaccgaggcgcatgtggccagccgcattgccacgggcaagaacaactcggaa
gacgttgccgggaacatcccggtctatatcgcctatttcaccgcctggccgcagacggat
ggcagcatcggctatttcggcgatgtctacgaccgcgacgcctatctgcaaaaagccctt
gaggccacccgcaaggcgcggggaacggcggaaagctga
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