Pannonibacter phragmitetus: APZ00_19945
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Entry
APZ00_19945 CDS
T04214
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
APZ00_19945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pphr02000
]
APZ00_19945
Transporters [BR:
pphr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
APZ00_19945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
ALV29032
UniProt:
A0A0U3N823
LinkDB
All DBs
Position
complement(4373672..4374769)
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AA seq
365 aa
AA seq
DB search
MRLASTLMASAIVLSAGAASAADLTIVSWGGAYSTSQNNAYHKPFMELRPDVKIINDESS
NEAVAKLRAMSEAGNVTWDVVDVEGPDSQRLCDEGLAMEIDFDEWLAAAPDGTSATADFG
PSLINKCFIPQIVFSTTFGYRTDVAAWNGKVPTSLCDIFDTENFPGKRSLEKRPKKNLEW
ALLCDGVAKDDLYTVLSTPEGLQKALAKLDTIKKDVIWWSAGAETPQRLADGEAVIGSTY
NGRLFSVIEEQKQPVAMLWDWQVFDFDGWIIPADVPEDKLPLIKEYIKFATDTQRLADQA
KYISYGPARASSQPLVGKHADLGIEMAPHMPTNPENQKNYLVNNIQWWADNQDEVEAAFQ
VWLTK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagactggcaagcacacttatggcttcggccattgttctgtcggctggcgccgcaagc
gccgcggatctgacgatcgtgtcctggggcggcgcctattcgacgtcgcagaacaacgcc
tatcacaagcccttcatggaactgcgtccggacgtgaagatcatcaatgatgaatcgtcc
aacgaggcagtcgccaagctgcgcgccatgagcgaggccggcaacgtgacctgggacgtg
gtcgacgtggaaggcccggacagccagcgcctgtgcgacgaaggcctggccatggagatc
gactttgacgaatggctggccgccgctccagatggcacctctgctactgcggacttcggc
ccgtcgctgatcaacaagtgcttcattccgcagatcgtgttctccaccaccttcggctac
cgcacggatgtggccgcctggaacggcaaggtgccgacgagcctgtgcgacatcttcgac
acggaaaacttcccgggcaagcgcagcctggaaaagcgcccgaagaagaacctcgaatgg
gcgctgctctgtgatggcgtggccaaggacgacctctacacggtcctgtccaccccggaa
gggctgcagaaggcactggccaagctcgataccatcaagaaggacgtgatctggtggtcg
gccggtgccgagacgccgcagcgccttgccgatggcgaagcggtgatcggctccacctac
aacggccgcctgttctcggtgatcgaggagcagaagcagccggtcgccatgctgtgggac
tggcaggtgtttgacttcgacggctggatcatccccgctgatgtgccggaagacaagctg
ccgctcatcaaggaatacatcaagttcgccaccgacacccagcgtctggcggatcaggcg
aagtacatttcctacggcccggcccgtgcctcgtcgcagccgctcgtcggcaagcatgcc
gacctcggcatcgagatggcgccgcacatgccgaccaacccggaaaaccagaagaactat
ctggtcaacaacattcagtggtgggccgacaaccaggatgaggtggaagccgcattccag
gtctggctgaccaagtaa
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integrated database retrieval system
