Pannonibacter phragmitetus: APZ00_22035
Help
Entry
APZ00_22035 CDS
T04214
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr00260
Glycine, serine and threonine metabolism
pphr00460
Cyanoamino acid metabolism
pphr00630
Glyoxylate and dicarboxylate metabolism
pphr00670
One carbon pool by folate
pphr00680
Methane metabolism
pphr01100
Metabolic pathways
pphr01110
Biosynthesis of secondary metabolites
pphr01120
Microbial metabolism in diverse environments
pphr01200
Carbon metabolism
pphr01230
Biosynthesis of amino acids
pphr01240
Biosynthesis of cofactors
pphr04981
Folate transport and metabolism
Module
pphr_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
APZ00_22035 (glyA)
09102 Energy metabolism
00680 Methane metabolism
APZ00_22035 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
APZ00_22035 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
APZ00_22035 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
APZ00_22035 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
APZ00_22035 (glyA)
Enzymes [BR:
pphr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
APZ00_22035 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
CTP_transf_like
Motif
Other DBs
NCBI-ProteinID:
ALV30308
UniProt:
A0A0L0J813
LinkDB
All DBs
Position
complement(4825178..4826485)
Genome browser
AA seq
435 aa
AA seq
DB search
MSDTLAGEPIYTGFFTQSLADADPDIFGAIQKEAGRQQHEIELIASENIVSKAVLEAQGS
VLTNKYAEGYPGKRYYGGCQYVDIVETLAIERAKELFGAKFANVQPNSGSQMNQAVFLAL
LQPGDTFMGLDLNSGGHLTHGSPVNMSGKWFNVVSYGVRKDDHLLDMEEIERLAHEHKPK
LIVAGGTAYSRVWDWKKFREIADAVGAYLMVDMAHIAGLVAGGAHPSPVPHAHVCTSTTH
KSLRGPRGGLILTNDEDIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALRPEFKAYAAA
VAANAKMLAQTLQEQGLDIVSGGTDNHLMLVDLRPKNATGKKAEAALGRANITCNKNGIP
FDPEKPFVTSGVRLGTPAGTTRGFGLAEFREIGMLITEVLDGLKAANSEEGNAAVEAAVK
AKVIELTSRFPIYPA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtcggataccttggccggcgagccgatctacaccggtttcttcactcaatctctggct
gatgccgatccggatatcttcggcgccatccagaaggaagccggccgtcagcagcacgag
atcgagctgatcgcctccgaaaacattgtctccaaggccgttctcgaggctcagggctcg
gtcctgaccaacaaatatgccgagggttatccgggcaagcgctactacggcggctgccag
tatgtcgacattgtcgagacgctggcgatcgagcgcgccaaggagctgttcggcgccaag
ttcgccaacgtgcagccgaattccggcagccagatgaatcaggccgtcttcctggcgctg
ctgcagccgggcgacaccttcatgggccttgacctcaattccggcggccacctgacccac
ggctccccggtcaacatgtccggcaagtggttcaatgtcgtgtcctacggcgtgcgcaag
gacgaccatctgctcgacatggaagaaatcgagcgtctggcccatgagcacaagccgaaa
ctgatcgttgccggcggcacggcctattcgcgcgtctgggactggaagaagttccgtgag
atcgccgatgcggtcggcgcctatctgatggtcgacatggcccatatcgccggtctcgtg
gctggtggcgcgcatccctcgccggtgccccatgcccatgtctgcacctcgaccacgcac
aagtccctgcgcggcccgcgcggcggcctgatcctgacgaacgacgaggacatcgccaag
aagatcaactcggccgtgttccccggtcttcagggcggcccgctgatgcacgtgattgcc
gccaaggctgttgccttcggtgaagcgctgcgtccggagttcaaggcctatgctgcagcg
gttgcggccaatgccaagatgctggcccagaccctgcaggagcaggggctggatattgtt
tccggcggcacggacaaccatctgatgctggtggatctgcgcccgaagaacgccaccggc
aagaaggcggaggccgctcttggccgcgccaacatcacctgcaacaagaacggcattccg
tttgacccggaaaagcccttcgtcacctccggcgtgcgccttggcactccggccggtacg
acgcgcggttttgggcttgccgagttccgcgagatcggcatgctgatcaccgaggttctc
gacggcctgaaggcggcgaacagtgaggaaggcaacgcggctgtggaagctgcggtgaag
gccaaggtgatcgaactcaccagccgcttcccgatctatccggcctga
DBGET
integrated database retrieval system