Pannonibacter phragmitetus: APZ00_22105
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Entry
APZ00_22105 CDS
T04214
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
APZ00_22105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphr03400
]
APZ00_22105
Enzymes [BR:
pphr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
APZ00_22105
DNA repair and recombination proteins [BR:
pphr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
APZ00_22105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALV29402
UniProt:
A0A0U2WAH2
LinkDB
All DBs
Position
complement(4839272..4839943)
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AA seq
223 aa
AA seq
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MAGVALDPARDCPLCPRLVAFREEHRRLSPDWFNAPVPSFGDKAPSLLIVGLAPGLRGAN
RTGRPFTGDYAGDLLYETMIDFGFARGVYEARPDDSLELVDALITNAVRCVPPENKPTGP
EIKTCRPFLIATLDAMPSVRAVLALGRIAHDTFLTALSLPRAKSPFVHGAGHDIQLSGRP
VKLFDSYHCSRYNTNTGRLTREMFRSVFTSIRAHVDETSSLRA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgttgctctggacccggcacgcgattgtccgctgtgcccgcgtctcgttgcc
ttccgcgaagagcaccggcgtctgtcgccggactggttcaacgcgcccgtgccgtccttt
ggtgacaaggcaccgtccctgctgatcgttggtcttgcgccgggcttgcgtggtgccaac
aggacagggcggccgtttaccggggattatgccggcgatcttctctacgagacgatgatc
gacttcggctttgccaggggcgtctatgaggcgcgtccggatgacagccttgagctggtg
gatgccctgatcaccaatgcggtgcgctgcgtcccgccggaaaacaagccgaccggcccg
gaaatcaagacctgccggccgttcctgattgcaacgcttgacgccatgccttcggtccgc
gcggtgctggcgctggggcgcattgcccatgacacgtttctgaccgccctgtcgctgccg
cgtgcaaaatcccccttcgtgcatggggcagggcatgacattcagctgtccggacggccg
gtgaagcttttcgacagctatcactgctcccgctacaacaccaacacgggacggctgacg
cgggagatgttccgcagcgtctttacttcgatccgcgctcacgtggatgagaccagctcc
ttgcgggcctga
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