Pannonibacter phragmitetus: APZ00_25360
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Entry
APZ00_25360 CDS
T04214
Name
(GenBank) ABC transporter substrate-binding protein
KO
K17241
alpha-1,4-digalacturonate transport system substrate-binding protein
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
APZ00_25360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pphr02000
]
APZ00_25360
Transporters [BR:
pphr02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Alpha-1,4-digalacturonate transporter
APZ00_25360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
ALV30547
UniProt:
A0A0U3PP42
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All DBs
Position
p.p-1:complement(247275..248537)
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AA seq
420 aa
AA seq
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MALKSLLAASALALMATTAHAGDVRIMWYSDGIEGEVFQDLINRFMKENPGINVIVDNVA
YSVIKEQLPVQLEAGNGPDIARVTSIKDLSKHWLDLRPLVADAKYWDDNFGANADWMRPD
GSDQISGFMTQLTLTGGFANKTLFEQAGVPLPGPEATWDDWADAARKVAASQQIPYPMTM
DRSGHRITGPAISYGANYIGADGKPQPLDEGAKAYLGKFIDWSKDGTMSKDIWVSAAGQS
YRAGADDFINGQVAFYYAGSWQVPNFANKIGDNFDWVATGSPCGPAACTGLPGGAALVAV
KYTKNPQEVAQVMDYLARKDIVKEFSERTLFLPAHQGVIAEGVNFNSDSQLVKDALNTFV
NATKTTSGLALKMPGWRWSDTMYGAVVTRIAQAVAGEMPAEDAFARIDSDVAEKVKASGL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcattgaaatcacttcttgctgcatcggccctggcgctgatggcaaccaccgcccat
gccggcgatgtgcgcatcatgtggtattcggacggcatcgaaggggaagtgttccaggac
ctgatcaaccggttcatgaaggaaaacccgggcatcaacgtcatcgtggacaatgtcgcc
tacagcgtcatcaaggaacagctgccggtgcagctggaagccggcaacggccccgatatc
gcccgcgtcacctcgatcaaggatctttccaagcactggctcgaccttcgtccgctggtg
gccgacgccaagtactgggacgacaacttcggcgccaatgccgactggatgcgcccggac
gggtcggaccagatctccggcttcatgacgcagctgacgctgaccggcggttttgccaac
aagacgctgttcgagcaggcgggcgttccgctgccgggcccggaagccacctgggatgac
tgggcggacgctgccaggaaggtcgcagccagccagcagatcccctacccgatgacgatg
gaccgttccggccaccgcatcaccgggccggccatatcctatggtgccaactacatcggc
gccgatggcaagccgcagccgctggacgagggggccaaggcctatctcggcaagttcatc
gactggtcgaaagacggcaccatgtcgaaggacatctgggtgtcagccgccggccagtcg
taccgcgccggcgccgacgacttcatcaacggccaggtcgccttctactatgccggctcc
tggcaggtgccgaacttcgccaacaagatcggcgacaatttcgactgggtggcgaccggc
agcccctgcggccccgccgcctgcaccgggcttccgggcggcgcggcgctcgtggcggtg
aaatacaccaagaatccgcaggaagtcgcccaggtgatggattacctggcccgcaaggac
atcgtgaaggagttctccgagcgcacgctgttcctgccggcgcaccagggcgtcatcgcc
gaaggcgtcaacttcaattcggacagccagctggtcaaggacgcattgaacaccttcgtc
aacgccacgaagaccacctccggcctggcgttgaagatgcccggctggcgctggtcggac
acgatgtacggcgcagtcgtcacccgcatcgcgcaagcggtggccggtgaaatgccggcg
gaggatgccttcgcgcgcatcgacagcgatgtcgccgaaaaggtgaaagcctccggcctc
tga
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