Candidatus Phytoplasma australasiaticum subsp. australasiaticum: H7685_001470
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Entry
H7685_001470 CDS
T09447
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
pphs
Candidatus Phytoplasma australasiaticum subsp. australasiaticum
Brite
KEGG Orthology (KO) [BR:
pphs00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H7685_001470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pphs03021
]
H7685_001470
Transcription machinery [BR:
pphs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H7685_001470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HTH_3
Motif
Other DBs
NCBI-ProteinID:
UQV26555
LinkDB
All DBs
Position
complement(314068..315372)
Genome browser
AA seq
434 aa
AA seq
DB search
MNLKMTIKKIYKQKILQFEKKGETVLVDILKKELKWFSHNVKDINNIYQKIFKCLLTASK
IINKKISKNFKSKKTQNELENADYDMLDIEDLEDENINIETIRSEEIQEDINLKKIANSI
KVDDPVRMYLKEIGQIPLLTLEKEKENSKLVYEGVKARQKIEDFKNKLISITDEELEKLQ
ISINKAVIAKNKLIEANYRLVVSVAKLYIGRKIKFLDLIQEGNMGLMRAVDKFDYTKGFK
FSTYATWWIRQAITRAVADQSRTIRCPVHVSDILNKISRLRGKLTQDLARKAENHEIAKA
MNIETKKINDLQMIEKETISLETSIRDEDDSSLGDFISDPNAISPHDYMLQETLKKTLEE
SLEEALTPREQLVLKMRYGILEGDNRVHTLEEVGAKLGVTRERIRQIEAKALRRLRSPSR
QNKLKILYKNINRK
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaatctaaaaatgacaattaaaaaaatctacaaacaaaaaattttgcaatttgaaaaa
aaaggtgaaacagttttagttgatattttaaaaaaagaattaaaatggtttagtcataat
gttaaagacataaataatatttatcaaaaaatttttaaatgtttgttaacagctagtaaa
ataattaataaaaaaatatctaaaaattttaaatcaaaaaaaactcaaaatgaattagaa
aatgctgattatgatatgttagatatagaagatttagaagatgaaaatattaatattgaa
actattcgttccgaagaaatacaggaagatattaatttaaaaaaaattgccaattcaatt
aaagttgatgatcctgtaagaatgtatttaaaagaaattggacaaatccctttattaact
ttagaaaaagaaaaagaaaattctaaattagtttatgaaggagtaaaagctagacaaaaa
atagaagattttaaaaataaattaatttctataactgacgaggaattagaaaaactccaa
atatcaattaataaagctgttatagcaaaaaataaattaattgaagctaattatcgatta
gtggtatcagtagctaaattatatataggcaggaaaattaaatttttagatttaatccaa
gaaggtaatatgggattgatgagagctgtagataaattcgattatacaaaaggttttaaa
ttttctacttatgcaacttggtggattagacaagctattactagagctgttgccgatcaa
tctcgtactattcgatgtccggttcatgtttcagatattttaaataaaatttcgcgttta
agaggtaaattaactcaagatttagctcgaaaagcagaaaatcatgaaatagctaaggct
atgaatatagaaacaaaaaaaattaatgatttacaaatgattgaaaaagaaactatttct
ttagaaacatctattcgtgatgaagatgattcttctttaggtgattttattagcgatcct
aacgctatttcacctcatgattatatgttacaagaaactttaaaaaaaactttagaagaa
tcgcttgaagaagctttaacccctagagagcaacttgttttaaaaatgagatatggaatt
ttagaaggcgataatagagtacataccttagaagaagttggagctaaattgggtgtgaca
cgcgaacgtattcgccaaatagaagctaaagctttaagacgtttaagatcaccttcaagg
caaaataaattaaagattttatacaaaaatataaatagaaaataa
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