Candidatus Pelagisphaera phototrophica: GA004_00225
Help
Entry
GA004_00225 CDS
T09061
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
ppht
Candidatus Pelagisphaera phototrophica
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppht02000
]
GA004_00225
Transporters [BR:
ppht02000
]
Other transporters
Pores ion channels [TC:
1
]
GA004_00225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
Motif
Other DBs
NCBI-ProteinID:
QXD32190
LinkDB
All DBs
Position
complement(43942..45993)
Genome browser
AA seq
683 aa
AA seq
DB search
MKQVYTCLLGLLSGLSALGQSSGQPSAEIFELSPIRVIAGDSLIDRGGLSSGFTTGAVDL
YQMQSVQETSALVPNLFVASSETRGYGDVITIRGTGNTLFFSPAGVAQYIDDVPSGDVFT
YSSELLSGNSLTVHRGGMGSFFGRNGPAGVIEIQSPKPMQEQRINLAAEFGSFSKRAFRA
NISGPISGSGVSHSLTVFHNERDGYLYNATLDRHTDTREARGAQYNLFFSPGNDWNARVK
LVTESIDDGSQRLTSLFSPDPFVVGSNLEGETQIDRNQISVHLDREFEWGVFKSITAFQK
WELDPSTVDLDLSPDPISTSAIQQDQNLFTQEFRFESNDSGSPLDWRAGLFFQDKETGGD
TTRVFPAPPFFPVFTENTAFETEEQSIAAFGHVSFDVTETFILDAGARVQKADASIDREK
SSPVGLAPISADKNGTYASVDFGFEAVMSDHFSFIGRSASAFKPAGYSAFTDLPNLAGFN
DESSWSNEIGFSFSTTDTTFKARVTVFDVSIDNYQLERSVPNATDYIVITADEVSSSGIE
AEVVWQPNPNFVIEGSVGSNDVTFEEHIDPFNGANLNGNEVPFTPSTTFRGSARYSLDNG
IFFQATFRGIGETFFDEGNTAMFRQGSHEVFDAQIGFRRERYSVVLYGENLGDEQYYTFI
NPQIFAATPGDPESFGVRLSARF
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagtttacacatgtcttttggggctgctatccggcttgagcgccttgggacag
tcctccggtcagcctagtgctgagatcttcgagttgtcacccattcgagtgattgcggga
gactccctcatcgacagaggaggactttccagcgggtttacgacgggggcggtagatttg
taccaaatgcagtccgtccaggaaacgtcggcactcgtgccgaacctcttcgtcgcttcg
agcgagacgcgcggatatggagatgtgattacgatccgaggcactggcaacactctgttc
ttcagcccggcgggagtggcccagtatatagatgacgttccctcaggtgatgtgttcact
tattcgtctgaattgctctcaggtaattcattgaccgtccatcgcggaggaatggggtcc
ttttttggtagaaacggaccggcgggcgtgattgaaattcaaagcccgaagccaatgcag
gagcagcgcatcaatttagcggctgaattcggatcctttagcaagcgcgcgtttcgagcg
aatatttccggtcccatttccggttcaggtgtttctcacagtcttacggtctttcacaac
gagcgagacgggtatctctacaatgcgaccctcgaccgccacaccgatacgagagaggct
cgaggggcgcagtacaatctgtttttctctccgggaaatgactggaatgctcgagtgaaa
ttggtcacggagtcgattgacgatggaagccagcgattaacctctctttttagccccgat
ccatttgttgtgggttccaacttggaaggggaaactcagattgaccgaaatcagatatcg
gttcatctcgaccgagagttcgaatggggtgttttcaagtccatcacggcttttcagaaa
tgggagttggatccctcgacggttgatctcgatttgagcccggacccgatttcgacctcg
gcgatacagcaggaccaaaacctgtttacgcaagagttccgcttcgagtcgaacgacagc
ggaagtccccttgactggcgagccggcctttttttccaagataaggaaaccggaggcgac
acgacgcgtgtctttccggctccgccgtttttcccagtctttaccgagaatacggctttc
gaaaccgaagaacagagcatagcggcgtttggacatgtctcctttgatgtgaccgagacg
ttcatcctcgatgccggagcccgtgtccagaaagcggatgcctctattgatcgggaaaaa
tcgtcgcccgtcggactcgctcctataagtgctgacaagaacggtacttatgcctctgtc
gacttcggtttcgaagcggtcatgagcgatcatttctcctttatcggacgatccgcatcc
gcgttcaagccagcgggctacagcgcgtttacggatttgccgaatctagccggtttcaat
gacgagtcgtcctggtcaaacgagattggattctcgttctcaaccacggataccaccttt
aaagcgcgggtaacggtgttcgacgtatccatagataactaccagttggaacggtccgtt
cccaatgcgacagactatattgttatcacagcggacgaagtctcttcttccggaatagag
gctgaagttgtttggcagccgaatccgaatttcgttattgagggaagcgttgggagtaac
gacgtcaccttcgaagagcacatcgatccttttaacggagcgaatctgaatggaaatgaa
gttcctttcacgcctagcaccacctttcgtggatctgctcgttacagcctagacaatggc
attttcttccaggccacttttcgcggcataggcgaaacgttttttgacgaaggaaatacc
gcgatgtttcgccaagggagccatgaagttttcgacgctcagatcgggtttagaagggaa
cggtattcggtggtgttatatggcgaaaatcttggggacgaacagtattacacgttcatt
aatccacaaattttcgcggcaactccaggagaccccgaatcatttggggtccggctaagt
gcgagattctag
DBGET
integrated database retrieval system
