Candidatus Pelagisphaera phototrophica: GA004_00510
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Entry
GA004_00510 CDS
T09061
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppht03032
]
GA004_00510 (gyrA)
03400 DNA repair and recombination proteins [BR:
ppht03400
]
GA004_00510 (gyrA)
Enzymes [BR:
ppht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GA004_00510 (gyrA)
DNA replication proteins [BR:
ppht03032
]
Prokaryotic type
DNA Topoisomerases
GA004_00510 (gyrA)
DNA repair and recombination proteins [BR:
ppht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GA004_00510 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QXD32245
LinkDB
All DBs
Position
101594..104026
Genome browser
AA seq
810 aa
AA seq
DB search
MDPASERISSASITDIMSTAYIDYSMSVIVSRALPDARDGLKPVQRRILYAMFREGLLHN
RSFDKCAGVVGEVLKNYHPHGDSSVYDTLVRMAQKWVMRYPLIDPQGNFGSVDGDSAAAY
RYTECRLTNIAEDLLRCIDEDTVNFVANYKESTTEPDVLPAGLPNLLMNGSTGIAVGMAT
NIPPHNLDELIDGICAQIDNPNIEIDELATYIQGPDFPTGGQIVGRKGIDEYMRTGRGIV
RIRGIMRKEEMDNDRDRLVITKIPYNVNRAVLVTKIADLVSSKDIEGISDLRDESDENTR
IVIELKRGEFPEVIMSKLFKKTALESSFGVNLLALDNHRPKQMNIKELINCYIDHRRDVI
YRRTAFRLKKAEDRAHILEGYKIALDNLDDFIKIIRSSVNRDEAKERLQGKYPLSDRQVA
AILDLRLYQLTGMERGKIEEEYAELIKLIEELRSILESEQKLLEIIKTELLEQKEKYGSP
RRCEIVPYEGDISKADMTPREGCFITVSHKGFIKRTSDSEYRTQKRGGKGVQGGNTYDED
FIEHIFTANTHDYIFFVMNNGRVYVEKVYEIPEGARTSKGRSIARVFQLQEGEKIAAMIC
LKEIVDTHHLVMCTKNGVVKKTNLIDYKNFRRGGIIGINIDEGDDLISAKLTSGEDDLVI
ITLKGQAIRFPETDLRDQGRATRGVRGIRLKEGDEAKAMEVVNNERTLLICGLSGQGKRT
KFEEYPTQKRGGSGVIAARTSGVSGALTVFESDEMMMLTKNGQAVRTKVSGISVIGRATK
GVRCINLNKGDLLLGVARIVEVEDDDGESL
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggacccagcatccgaacgcatttcttcagccagcatcacagacatcatgtcgacggcc
tacatcgattattcgatgtcagtcatagtcagtcgagctctgcccgacgcccgggatggg
ctcaaacctgttcagcgacgcattctttacgcaatgtttcgcgaaggcctgctccacaac
cggtcattcgacaaatgtgccggcgttgttggtgaagtactaaagaactatcaccctcat
ggcgattcctccgtctatgacactctcgttcgtatggctcaaaagtgggttatgcgatat
cccctgatcgatccccaaggcaactttggatctgttgatggcgactctgccgcggcttat
cgatataccgaatgtcggctaaccaatattgcagaggaccttcttcggtgcatcgacgaa
gacacagtcaactttgtcgctaactacaaggaaagcaccactgaacctgatgtgcttcct
gcgggactaccgaatcttctcatgaacggttcaacggggatcgcagtggggatggctacc
aatattccaccccacaatcttgacgagcttatcgacgggatctgcgctcagatagataat
ccaaacatcgaaatcgacgagctcgctacatacatccaaggtccggactttccaactggg
ggccaaatcgttggccgcaaaggcatcgacgagtacatgcgcacgggtcgaggcattgtt
cgcattcgcggcataatgcgaaaagaggagatggacaatgatcgcgatcgactcgtcatc
accaaaatcccctacaatgttaatcgtgcagtccttgtgacaaaaatcgcagatctcgtt
tcctcaaaggacattgaggggatcagtgatctccgagacgaatcagacgaaaacactcgt
attgtcatcgaactgaaacggggcgaattccctgaagtcatcatgtcaaagctgttcaag
aaaacagcgcttgaaagcagcttcggcgtcaatctcctcgccttggacaatcatcgtccc
aagcagatgaacatcaaggaactgatcaattgctacattgatcatcgccgcgatgtcatc
taccgccgtaccgcatttcgactcaaaaaagcggaagacagggcccatatcctcgaggga
tacaaaatagctctcgataacctagacgacttcataaagatcattcggtcttccgtaaat
cgcgatgaagcgaaagagaggctgcaagggaagtatcctctttccgatcgacaggttgct
gcgattctcgaccttcgactctaccagctcaccggtatggagcgaggcaagatcgaagag
gagtacgcagagctcatcaagctgatagaagagctgcgaagcattctggaaagcgaacag
aagttgctcgaaatcatcaaaaccgaactgcttgaacagaaggagaagtacgggtcccct
cggcgctgtgaaatcgttccctacgaaggcgacatttcaaaagcggacatgacccctcgc
gaaggctgcttcatcaccgtttcccacaaaggattcatcaaacgtactagcgatagtgaa
taccgcacccagaagcgaggcgggaaaggcgttcaaggcggtaatacttatgacgaggat
ttcatcgagcacatattcaccgctaatacgcatgactacattttcttcgtcatgaacaat
ggtcgcgtgtacgtggaaaaggtatacgagattcccgaaggcgcccgaacctccaaaggt
cgctccatcgcacgagttttccaattgcaagagggggaaaaaatcgccgctatgatttgc
cttaaggaaatagtggatacgcatcacttggtaatgtgtaccaagaatggggtcgttaaa
aaaactaatctgatcgactacaaaaatttccgccgcggagggatcatcggaatcaatatt
gatgaaggggatgaccttatctcggccaagctaacaagtggtgaggacgatctagtcatc
ataaccctgaaaggccaagcaatccgatttccggagaccgacttgcgcgaccaaggccgc
gccactcgcggggtccgtggaatacgcttgaaagagggcgacgaagccaaagcgatggag
gtcgtcaacaacgaaaggactctcctcatctgcggcctaagtggacaggggaagcggacg
aagttcgaagagtatccgactcaaaagcgcggagggagtggagttattgcagcccgaact
tcaggcgtttccggagcgttgacggtgtttgagtcggacgaaatgatgatgctaacgaaa
aatggtcaggctgtcaggacgaaggtgtctggaatcagcgtgattggccgagcgaccaag
ggcgtccgttgcatcaatttaaacaaaggagacctccttctcggagttgcgcggatcgtc
gaagttgaagacgatgatggggaaagcctctag
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