Candidatus Pelagisphaera phototrophica: GA004_00530
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Entry
GA004_00530 CDS
T09061
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00450
Selenocompound metabolism
ppht01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
GA004_00530
Enzymes [BR:
ppht01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
GA004_00530
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
GA004_00530
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Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
FTCD_N
Motif
Other DBs
NCBI-ProteinID:
QXD32249
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All DBs
Position
107007..108254
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AA seq
415 aa
AA seq
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MIDRPTPPPIPEALKRAREDFPILKREVSGKPLIYLDNAASTQKPQSVIDAITQYYAYEN
SNIHRGVHLLSTEATAAYENARTKLAAYLNANDESEIVFTRGATESINLVAHSFLAPLVS
AGDEILISHMEHHANIVPWQLLCERTGAVLKVAPIFDNGDLDTDSYISLMGPRTKLAAIV
HVSNSIGTVNPIERIIEAAKDRSIPTLIDSAQSIQHMKLDVQVLDCDFLVFSGHKMFMPT
GIGGLYGKRAKLDSMRPYQGGGDMIAHVSFDGTTFKAPPYRFEAGTPHIAGGIGIAAGID
YIESIGRDLIHDYETQLIDYAANRLKSTAGVRLIGEPSNRAGAISFVMNAAHAHDIGTIL
DTEGIAVRSGHHCCEPLMKRFGISATARASIALYNNHEDIDALVESLGKVHQLFG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaccgacccacaccaccgccaattcctgaagccctgaaaagagctcgcgaggat
ttccctatcttgaagagagaagtcagcgggaagccacttatctacttagacaacgccgcc
tcaacccagaagccgcaatcagtgatcgatgccatcacgcaatactacgcctacgaaaac
tcgaatatccatcggggcgtccacttactaagtaccgaggccaccgcagcctacgaaaac
gctcgaaccaaactcgcggcctatcttaacgctaatgatgaatcggaaatcgtttttact
cgaggggctactgaatcgataaatctcgtcgctcactcttttctggcgcctcttgtttca
gcgggcgacgaaatcctgatttcccacatggagcatcacgccaacatagttccctggcag
ctcctttgcgaacgaacaggggcggtcctcaaagtagcaccgatttttgataacggtgat
ctggacacggattcctatatttcccttatgggacctcggaccaaactggcagcgattgtc
catgtttccaattcgatcgggactgtaaatccaatagagagaattatcgaggccgccaag
gacaggagcattcccacactaatagactcagcccagtcaattcagcacatgaagctggac
gtccaggtgctcgactgcgattttcttgttttttctgggcacaagatgttcatgccaacg
ggcattggcggcttatacggaaaacgcgccaaactcgatagcatgcggccgtatcaaggc
ggtggagacatgattgcgcacgtttctttcgatggaaccacctttaaagcaccaccatac
aggttcgaagcgggaacccctcacattgcaggaggcattggtatcgcggctggcattgac
tacatcgaatcaatagggagagatctgatccacgactacgagactcagcttattgactac
gctgccaaccgtttgaaatctactgccggggtaaggctaatcggcgagccatcaaatcgt
gctggagctatatcatttgtcatgaatgccgcccatgcccatgatattggaaccatcctc
gatactgagggaattgccgtgcggtccggtcatcattgctgtgagccattgatgaagcgt
tttggtatttcagcgacggcccgtgcatctatcgctctttacaataatcacgaagatatc
gacgctctcgttgaatcactcggcaaagtccatcagctattcgggtag
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