Candidatus Pelagisphaera phototrophica: GA004_00755
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Entry
GA004_00755 CDS
T09061
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppht03400
]
GA004_00755
Enzymes [BR:
ppht01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GA004_00755
DNA repair and recombination proteins [BR:
ppht03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GA004_00755
Prokaryotic type
GA004_00755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QXD32293
LinkDB
All DBs
Position
155444..156865
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AA seq
473 aa
AA seq
DB search
MTLNRICRSNPLPNPTNIKTYQKSLFLFRRDLRVDDNTGLNRALIQSEEVVPAFVLDPRQ
TEPHDYRSEPGLWFLHDSLEELDQDLRDQNSALFLFPGKPHELVEKWVRKLGIEAIWVNR
DYTPFSIQRDRALLSACKKQGIAFPTCSDLLLNEPEESLKADGTPYTVFTPYFNRARTIK
VDSVSKLTAGKGRLASPAKSLKVGKLLEGLIRDIPEYPSVKGGRKEARNTLHRLSRLSDY
ANDRDIPSLESTSHLSAHLKFGTCSVREAYWTIRRKLDPENPLIRQLYWRDFLTQIAFHF
PHVFGNSFKEKYNKVPWKQDTQAFELWREGRTGFPIVDAGMRQLNQTGFMHNRVRMVVAS
FLTKDVHIDWRWGERHFAQRLVDYDPCVNNGNWQWAASTGCDAQPYFRIFNPWRQQERFD
PDCEYIKKWIPELSSLSPRQIHRWEGELGVDYPAPILNHKRAALKAKMLFDRL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacactaaaccgcatttgtagatccaacccactcccgaacccaacgaacatcaaaact
taccaaaaaagccttttcctgtttcgacgcgacctgcgggtcgatgacaatacgggactc
aaccgagcccttattcaatccgaagaggtcgtacccgcctttgtccttgatccccgacaa
accgagccgcacgactaccgtagcgaaccgggactctggtttctacatgactctctagag
gagctcgatcaggacctgagagatcagaactcagccctctttctcttcccaggcaagcca
cacgaactcgtcgaaaaatgggtccggaaactcggaatcgaagccatctgggtcaatcgc
gactacaccccttttagcattcagcgggaccgcgctctcctgtcggcctgcaaaaagcag
ggcatcgcgtttcccacctgcagcgacttgcttctcaacgaacccgaggagtccctcaag
gcggacgggacgccctataccgtttttactccctacttcaatcgagcccgcacgatcaaa
gtggattccgtcagcaagttgaccgccggaaaaggcaggctcgcctctcccgcaaagtcc
cttaaagttgggaaactccttgaaggactaatccgcgatatcccagaatacccttccgta
aaagggggtcgcaaagaggccagaaacacgctccatcgactgtctaggctttctgactac
gcgaatgatcgcgacattccctcccttgaatcgaccagtcacttgtccgcccacctaaaa
tttggaacctgctccgtccgcgaggcatactggacgattcgacgcaaactggatccggaa
aatcctctgattcgccaactttattggagagatttcctcactcaaatcgcctttcacttt
ccacatgtgttcggaaattccttcaaggaaaagtacaataaggtcccctggaagcaggat
acccaggcattcgaactttggagagaaggcagaaccggctttcccatcgtcgacgccggg
atgcgccagctcaaccaaacgggatttatgcacaaccgcgtgcgcatggtcgtggcgtcc
tttctcaccaaggacgttcacatcgattggagatggggcgaacgccacttcgcccaacgc
ttggtcgactatgacccctgcgtcaacaacggtaactggcaatgggcggcgtcaaccggc
tgtgatgcccagccttatttccgcatattcaatccttggcgacaacaagaacgattcgat
ccagattgcgaatatatcaaaaagtggattcccgaactaagttcgctatcaccccgccaa
atccatcgctgggaaggtgagctcggagtcgactacccggccccaatcctgaaccacaaa
agagccgccctaaaagccaagatgcttttcgatagattatag
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