Candidatus Pelagisphaera phototrophica: GA004_01190
Help
Entry
GA004_01190 CDS
T09061
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GA004_01190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppht02000
]
GA004_01190
Transporters [BR:
ppht02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GA004_01190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
QXD32373
LinkDB
All DBs
Position
236847..237920
Genome browser
AA seq
357 aa
AA seq
DB search
MIRFLPSLLAALILLFGCSGPTSSESGSSQPSGRKIRIEVASFIPLSVNVLGEQLTHIAE
ELEAISGGNVELEIFEPGALVGALEILDAVSGGKVDAGYGASGFWAGKLSAAPLFCSIPF
GPDNSEFLSWLYQGNGMKLYQEMYDTSGFDVKVLVCAMLPPETSGWFASEIKSADDLKDL
KMRFFGLGGVVMGKLGVSVSVLPGGEIFPALEKGVIDATEYSLPSIDESQGFHKLVNFNY
FPGWHQQATTHELIFNKQFWNRLTPTQQAQIESACKSSIVHSIAYSEALQSAALKRNIER
GVNVKTWSPEMLELYKATWKEVAAEESAKNPFFKKVWEDLTAFREDYATWADRAFLK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtttcctgccaagtttattagccgcgttgattttacttttcgggtgctcaggc
ccgacatcgagtgagtctggttcgagccagccgtcgggacgcaaaattcgcattgaggtc
gcttctttcatacccctctcggtcaatgtcctaggtgagcagctcacccatatcgcagag
gagctggaagccatcagcggtggcaatgtcgagctggaaatcttcgaaccaggcgcactt
gtaggagccttggaaatcctggacgccgtatcgggcggaaaagtggacgctggatatggc
gcttctggcttttgggccggaaaactctccgccgcccctcttttttgctcgataccattt
ggaccagacaattcggagtttctgtcctggctctaccagggtaacggcatgaaactgtac
caggagatgtacgacacatctggcttcgatgtcaaagtccttgtttgcgcaatgcttcca
cccgaaaccagtgggtggttcgcgagcgagataaaatctgccgacgacttgaaggattta
aaaatgcgattctttggcctcggcggagtcgtcatgggaaagctaggcgtatcagtttcg
gtactaccaggcggcgagatctttcctgcacttgagaagggggtgatcgacgcaaccgag
tactccctcccgtccatcgacgaaagccaagggtttcacaagctcgtcaatttcaactac
tttcccggttggcaccaacaggcaacgacccacgaactcatcttcaacaagcaattctgg
aataggctgacgcccactcaacaagctcaaattgaatcagcttgtaaatcgagtatcgtc
cattccattgcatatagtgaggccttacagtcggcagctctaaagagaaatatagaacgc
ggcgtgaacgtgaaaacctggtctcctgaaatgctagaactctacaaagccacttggaaa
gaagtggcagcagaagagtctgcaaagaatccgtttttcaaaaaggtctgggaagacttg
acggcttttcgagaagactacgcaacttgggcggatcgggccttcttgaaatag
DBGET
integrated database retrieval system
