Candidatus Pelagisphaera phototrophica: GA004_01220
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Entry
GA004_01220 CDS
T09061
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00020
Citrate cycle (TCA cycle)
ppht00190
Oxidative phosphorylation
ppht00650
Butanoate metabolism
ppht00720
Other carbon fixation pathways
ppht01100
Metabolic pathways
ppht01110
Biosynthesis of secondary metabolites
ppht01120
Microbial metabolism in diverse environments
ppht01200
Carbon metabolism
Module
ppht_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppht_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GA004_01220
00650 Butanoate metabolism
GA004_01220
09102 Energy metabolism
00190 Oxidative phosphorylation
GA004_01220
00720 Other carbon fixation pathways
GA004_01220
Enzymes [BR:
ppht01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GA004_01220
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
GIDA
HI0933_like
NAD_binding_8
AlaDh_PNT_C
Pyr_redox
FAD_binding_3
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
QXD32379
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Position
complement(242333..244249)
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AA seq
638 aa
AA seq
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MILDSKIPSGPLEKKWSKHIMDGKIVNPANKRKYEVIVVGTGLAGASAAATLAELGYSVN
AFTFHDSPRRAHSIAAQGGINAAKNYQNDGDSVYRLFYDTVKGGDFRSRESNVYRLAEVS
ANIIDQCVALGVPFAREYGGLLANRSFGGAQVSRTFYARGQTGQQLLLGAYSGLSRQIGL
GTVRMNANHEMLELVTIDGHARGIITRNVITGAIERHSAHAVVLATGGYGNVFYLSTNAM
NSNVTATWRAHRKGAAFANPCYTQIHPTCIPVSGDYQSKLTLMSESLRNDGRIWAPKKKE
DRRPADQIPEDERDYYLERKYPSFGNLAPRDISSRAAKEACDEGRGVGESGLGVYLDFKD
AIDRLGESAIRERYGNLFDIYHEITGESAYKQPMRIYPAVHYTMGGLWVDYNLMSSIPGC
FVIGEANFSDHGANRLGASALMQGLADGYFVLPYTIPHYLADIPRDPAPPTDHPEFAKAE
EEVVNRTKALLDSNGKQTVRSFHKRLGKIIWDKCGMSRSKSGLEEGIRLISELRQEFEED
VCVPGAADTLNQSLELAGRVADFFELGELMCRDALAREESCGGHFREEHQYPDGEAMRND
EDYGHVSAWEWRGKNQEPELHREKLEYEAVKMVTRSYK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgatactggattctaaaataccttctggcccgctggagaaaaagtggagcaagcacata
atggatgggaagatagttaatcccgccaacaagcgcaagtacgaggtcattgttgtggga
acgggtctggcgggcgcgtctgcagcggcaaccttggctgagctaggttactcggtaaac
gcgtttacgtttcacgatagcccacgtcgtgctcattcaatcgcggcacaaggagggatt
aatgctgcgaagaactatcagaacgatggggacagcgtgtatcggctgttctacgacact
gtgaaaggtggggacttccggtctcgcgaatcgaacgtctaccgactggctgaagtgagt
gcgaacatcatcgatcagtgcgtagcattgggggtgccgtttgctcgcgagtatggagga
ttgcttgcgaaccggtcttttggcggagcccaggtatcgcggaccttttacgctcgaggt
cagactggacagcaacttcttctgggggcctactcgggcttgagtcgtcagatcggtttg
gggacggtgcgaatgaatgcgaatcacgagatgctggagctcgtgacaattgatggccac
gccagaggaatcatcactcgcaatgttattacgggggccatagaacgtcactcggcccat
gccgttgtactcgctacgggcggctatggcaacgtgttctatctttcgactaacgccatg
aatagcaatgtgaccgcaacatggagggctcaccgaaaaggagcggcgtttgccaaccct
tgctatacacagattcatccgacgtgcataccggtctccggagactaccagtccaagttg
actcttatgtctgagtcgctccgaaacgacggacgcatttgggcgccgaagaagaaggaa
gataggcgacctgctgatcagattcctgaggatgagcgtgactactatttagaacgtaag
tatccaagctttggaaacctagcgccgcgcgatatttcttcgcgggcggcaaaagaggcg
tgcgatgaaggcagaggtgtgggcgaatccggactgggggtttatctcgatttcaaagat
gccattgatcgcctcggagagagcgcgattcgggaacgttatggtaatctctttgacatt
taccatgagataaccggcgagagtgcttacaagcaacctatgcggatttatccggcggtt
cactacaccatgggtggtctgtgggtagactacaacttgatgagttcgattcctgggtgt
tttgtgattggcgaagccaatttctcggatcatggtgccaatcggcttggggcctctgct
ttgatgcaaggtctggcggatggctatttcgtattgccgtataccatccctcactactta
gcggatattccgcgagatcctgctccaccaacggatcatccggaatttgcgaaggctgag
gaagaagtggttaaccgaaccaaagctctcctagatagtaatggaaagcaaactgtaaga
agttttcacaagcgcttagggaaaatcatctgggacaagtgtggtatgtcgcgaagcaaa
agcggtctggaagaagggattcgactgatatcagagcttcgtcaagagtttgaggaggac
gtttgtgttccgggtgctgcagacactttaaatcaatcgcttgagttagcgggtcgagtc
gccgactttttcgagctgggagagttgatgtgtcgtgacgctctcgcacgagaagaatca
tgtggcggtcacttcagggaggagcaccagtatccggatggagaagctatgcgtaatgac
gaagactacggtcatgtttccgcctgggagtggaggggcaagaatcaggaaccagagctc
cacagagagaaattagaatacgaggcggtcaagatggtgacgcgcagctataagtaa
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