Candidatus Pelagisphaera phototrophica: GA004_02095
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Entry
GA004_02095 CDS
T09061
Name
(GenBank) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GA004_02095
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppht01007
]
GA004_02095
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppht03016
]
GA004_02095
03029 Mitochondrial biogenesis [BR:
ppht03029
]
GA004_02095
Enzymes [BR:
ppht01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
GA004_02095
Amino acid related enzymes [BR:
ppht01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
GA004_02095
Transfer RNA biogenesis [BR:
ppht03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
GA004_02095
Mitochondrial biogenesis [BR:
ppht03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
GA004_02095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
Peptidase_M99
Motif
Other DBs
NCBI-ProteinID:
QXD32538
LinkDB
All DBs
Position
complement(447399..448910)
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AA seq
503 aa
AA seq
DB search
MAKAQASKNAQMDAIVALCKRRGFIFQSSEIYGGYNGFFDFGPLGVELKQNIKDAWWQDM
VHRRDDIEGLDSSIIMSPKIWEASGHVGGFSDPMVDCKVSKMRYRADQLFFSPVVVDGEN
IGYVSVIEDGYMEATAQAAAEKMKRKQGVQGELAPIELKDYTEADPSQYELIPSPATGEP
GSLTPPRDFNLMFETKVGALSDSTAIAYLRPETAQGIFANYKNVVDTGRVKIPFGIAQIG
KAFRNEITPRNFIFRSREFEQMEMEYFIAPEADWKSAHREWIDWCKNWLVSVGLPEEMLG
EDVHPQEKLSHYSRGTTDITFRFPFGEQELWGIACRGNFDLTQHQEYSGKSMEIFDEAAK
AKYIPHVVEPSLGVDRVLLAILTAAYTEDEIGGERRSLMKFHPRVAPYKIAVLPLLKNKP
ELVDRARTLYGKLQRKFNAFWDASGAIGRRYRRMDEIGTPWCVTIDFDTVEKDGTVTLRD
RDTTEQKRVTEEELLAFLDEQLF
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcccaagcatcaaaaaacgcccaaatggacgcaattgtcgctctctgcaaa
cgacgcggattcatcttccagtcttcggaaatctacggaggctacaacggcttcttcgac
tttggcccactcggcgttgaacttaagcagaacattaaagatgcctggtggcaggacatg
gtccaccggcgcgacgacatcgaaggcctggattcctcgatcattatgtcgccaaaaatc
tgggaggcgtctggccatgtcggcggattctcggatcccatggtagactgcaaagtctcg
aaaatgcgctaccgggcagatcagcttttcttttctcccgtcgtcgtcgatggcgagaac
attggctacgtctccgttattgaggatggatatatggaagccaccgctcaggccgcagcc
gaaaaaatgaagcgtaagcagggtgttcaaggcgaactggcccctatcgagctgaaagac
tacaccgaagcggatccttctcaatatgagctaatcccttccccggcaacaggggagcca
ggctcccttactccgccgcgcgacttcaacctcatgtttgaaaccaaggtcggggccttg
agtgactcgaccgcgattgcctaccttcgtcccgaaaccgcccagggaatctttgcaaac
tacaagaacgtcgtcgataccggccgggtcaaaatcccctttggaattgcccaaatcggg
aaagcgtttcgcaacgagatcaccccgcgaaacttcattttccgctcccgagaattcgag
caaatggagatggagtacttcatcgcaccagaagcggattggaagtctgctcaccgagaa
tggattgactggtgtaagaactggctcgtttctgtgggcttgcctgaggaaatgttgggc
gaggacgttcatccccaagaaaagctctcccactactctcgtggaaccaccgacatcacc
tttcgattcccgttcggagagcaagagctatggggtatcgcctgtcgtggcaacttcgac
cttacccagcaccaggaatattcgggtaagtccatggagatcttcgacgaagcggctaag
gcaaaatacatcccacatgtcgtcgaaccttctctcggtgtcgatcgcgttctcctcgca
attcttaccgcagcctataccgaagatgaaatcggcggggagaggcgctcgctgatgaag
ttccacccgcgagtggctccctataaaattgcggtcctcccccttcttaaaaataaaccc
gagctcgtagatagggcgagaacgctatatggcaaattacagcggaaattcaacgcattc
tgggacgcatccggcgccatcggtagacgctatcgtcgtatggatgaaatcggtacacca
tggtgtgttacgatcgacttcgacacggtggaaaaggacggcaccgtcactttgagagat
cgcgacacaacagaacagaaacgcgttaccgaggaagaactgctcgcttttctggatgag
cagctcttttga
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