Candidatus Pelagisphaera phototrophica: GA004_02800
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Entry
GA004_02800 CDS
T09061
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppht03400
]
GA004_02800
Enzymes [BR:
ppht01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
GA004_02800
DNA repair and recombination proteins [BR:
ppht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
GA004_02800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
Intron_maturas2
Motif
Other DBs
NCBI-ProteinID:
QXD32670
LinkDB
All DBs
Position
605183..606688
Genome browser
AA seq
501 aa
AA seq
DB search
MPSRPRRRSLLVFPHQLFAEHPGLAEEPSQIYLIEDSLFFGDNEHPARFHKQKLWLHRSS
MKHFETRLRKAGHTVTYIEHVPGTSALKLLFEEMIQHTNEDLLVAEVHDFLLQKRLDRFC
SLYSKDIESLKTPMFINDGATNRGFRDGKKRWFMADFYKFQRRRLGILMDGDKPTGAEWS
YDEQNRKKVPKRMLSEIPGIPFPERDALDLEARSHILANYPDNPGSLDSLYYPTRHEDSE
EWLQQFLTSRFTLFGDFEDAMVEGKNWLWHSVLTPMLNIGLLTPEQILRSALAHSNSHEI
PLNSLEGFIRQIIGWREFMRATYVDLGVTMRTSNHWKHSRKIPISFYEGTTGIAPIDDVI
ARLKKTGYCHHIERLMTLGGFMFLCEFDPDEIYRWFMEMFVDSYDWVMVPNVYGMSQHAD
GGGVATKPYFSGSAYIRKMSNYPAGDWTSVWDGLYWRWILSHADSLAKNPRWAMMCATAR
RMAPGKKASHLEAANGFLAQL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgccctctcgccctcggcgcagatctctccttgtttttcctcatcagctcttcgcagag
catcccggactcgcggaggaaccgtcccagatctacctgatcgaagacagtcttttcttt
ggcgacaacgagcatccagcccgctttcacaagcaaaagctctggctgcaccggtcctcc
atgaagcactttgagaccaggctaaggaaggccgggcacaccgttacctatatcgagcat
gttcccggaacctctgccctgaagctcctcttcgaagagatgattcagcataccaatgag
gatctcctcgtggccgaggttcacgattttcttctccaaaagagattggatcgcttttgc
tccctgtattccaaagacatcgaatccctcaaaacgcccatgtttatcaatgacggggcg
accaaccggggatttagggacggcaaaaaacgctggtttatggcggacttttacaagttt
caaagacggagactgggtatcttgatggacggggacaagcccaccggggccgagtggagc
tacgacgagcagaataggaagaaagttcccaagcgtatgctaagtgagatccccggtata
cctttccctgagcgggacgctctcgacctggaggcacgcagccacatcctcgcaaactat
cctgacaaccccggtagcctcgactctctctattacccaacccgtcacgaggacagcgaa
gaatggctccagcaattcctcacttcacgtttcaccctcttcggggattttgaggatgcc
atggtggagggaaagaactggctctggcacagtgtcctgacccccatgttgaatatcggg
ctcctgactccagaacagatccttcgctccgccctcgcccattccaacagccacgagatc
ccactcaattctttggaaggatttatccggcagattattggctggagggaatttatgagg
gccacctatgtcgatcttggcgtaacaatgcgcacctccaatcactggaaacattcccgg
aagatcccgatctctttttatgaaggtaccaccggaattgcgcccatcgatgacgtcatt
gcacggttaaaaaaaaccggctattgccaccatattgagcggctcatgaccctcggggga
ttcatgttcctctgcgaatttgacccagatgaaatctaccgatggttcatggagatgttt
gtcgatagctatgactgggtcatggttcccaacgtctacggcatgagccagcatgccgat
ggcggtggagttgcgacgaaaccctatttttccggttccgcctacatacgcaagatgagc
aactaccctgccggcgactggacttccgtatgggacgggctctactggcgctggattctc
agccacgccgactctctcgcgaaaaacccccgttgggcgatgatgtgcgcaaccgcgagg
cgcatggccccgggaaaaaaggcctcccatctggaagcggccaacggctttctcgctcag
ctctga
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