Candidatus Pelagisphaera phototrophica: GA004_02810
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Entry
GA004_02810 CDS
T09061
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
ppht
Candidatus Pelagisphaera phototrophica
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ppht02022
]
GA004_02810
Two-component system [BR:
ppht02022
]
NtrC family
Unclassified
GA004_02810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
Response_reg
AAA_5
AAA_16
AAA
Mg_chelatase
AAA_2
AAA_19
HTH_30
TsaE
Phage_NinH
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QXD32672
LinkDB
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Position
607393..608811
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AA seq
472 aa
AA seq
DB search
MIQSSINVVYLGHSQAIQLKVEKLLQDGSLLSFFDSMTSALEHIKIHPGKTDIFIASDLK
DMDPLELVLLLKEKHPSLPIIVLSEIRKSSLAIEIIKAGAHDFFLLPISSSELMDSLKQV
VVNSRLSSKPVEIGEVYSEQDTIIGRSKAMRDIYKQLGRIASQSVTVLLRGETGTGKELI
ARAIYQHGHRAHKGFITVNCGAIPENLLESELFGHEKGAFTGASQLRVGRFEQAHGGTIF
LDEIGDLDLSLQVKILRVLQERTIQRLGSSKDISIDVRIIAATHRSLEAMISEGTFREDL
FYRLNVISISIPPLRDRRDDIPDLINYFLQRFAKEYGLSVPSISAKALEFLKRLEWPGNI
RQLQNVVSKALLDSTGPSLGWERFDSIVRESQLIAKKQTSLTQMIEQELNRAANNETDAA
LPILTHNFEREVFDMAIKRTDGNQTKAARLLGVSRLTLRAKLRLFGKHPKGQ
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgattcaatcgagtattaacgttgtttacttaggacacagccaagcgattcagctgaag
gttgagaagctcctacaagatgggtctttgctctcgtttttcgatagtatgacttctgca
cttgagcacataaagattcatcccggcaaaacggatatcttcatcgcaagtgatttaaaa
gatatggatccgttagaattggtcctattattgaaggagaaacatccaagcctcccgata
atagtactgagcgagatcaggaagagcagcttggcgatagaaatcataaaagctggagct
cacgatttctttctcttgccgattagttcctccgaactgatggattccttaaaacaggta
gtcgtcaattctcgtttgagctccaaaccggttgaaattggggaagtttacagcgagcaa
gataccattatcggccgcagcaaagctatgcgtgacatctacaagcaactcggccggatt
gcatcacaatcagtgactgtgcttttgcgaggcgaaactggtactggcaaggaactaatt
gcccgtgcaatttatcagcacggacatcgggctcacaaaggctttattactgtaaactgt
ggagccattccagagaacctgcttgagagcgagctctttggacatgaaaaaggtgctttt
accggtgcaagtcagttgcgtgttgggcgcttcgagcaagctcacggcggcactattttc
ctcgatgaaatcggagacttagatctctcgctacaagttaaaattttacgcgttctgcaa
gaaagaacgattcagcgcttagggagttccaaagatatctcaattgatgtccgtatcatc
gcagcgacgcatcgtagcttagaggctatgatatcggagggaacgtttagagaagatcta
ttttatcgtttgaatgtgatatcaatttcaattcctccgcttcgagatcgacgagacgat
attccagacttgattaattattttttgcagaggtttgcaaaagagtacggactaagcgtc
ccgagcatatctgcaaaagcgttggaattcttgaagcgattagaatggcctggaaatata
cgccagcttcaaaatgtagtgagcaaagcactgttagattctactggcccttcactcggg
tgggagcgttttgacagcatagttcgggagtctcaacttattgcaaaaaagcagacaagc
ctcacacaaatgattgagcaagagttgaatcgagcagcaaacaacgagaccgatgcagca
ctgccaatcttgacccataatttcgagcgagaagtcttcgatatggctataaaaagaaca
gatggaaatcagacgaaggcagcgcgattactgggcgtctcgcgcctaacgctgcgagcg
aagcttcgactttttggaaagcaccccaaaggacagtga
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