Candidatus Pelagisphaera phototrophica: GA004_02980
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Entry
GA004_02980 CDS
T09061
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K24708
ATP-binding cassette, subfamily B, putative efflux pump [EC:7.6.2.-]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppht02000
]
GA004_02980
Transporters [BR:
ppht02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
GA004_02980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
Zeta_toxin
AAA_25
AAA_23
AAA_29
AAA_22
nSTAND1
nSTAND3
DEC-1_N
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QXD32703
LinkDB
All DBs
Position
640148..641902
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AA seq
584 aa
AA seq
DB search
MKTIWRVSGYLFRYKAMFWMTIGLAITSTLFVMVIPLVTRYVINEVLPEKEMGNLWLAIC
AIAGCFFMRELFNSFRIRLNNTLEQKVLIDIRKDLHDKLMELPIGYFDSRKSGDIASRVI
EDVESVERVILDGTEQGSTAILTVLGVASIMFYFEPTLATLMILPIPIMLVMQHFHFRAQ
GKNWRKVRAAAGELNSLLIEDIQGNRLINSFALKNQEKKRFQERLSELKKRTLISMYRWS
IHGPITNFVVSLGTVAVVGYGGYLFATEPERFGTGDLLMFFQLGGMLYMPLSQLNGLNNL
LATGKASSERVFEMLDYPVEITNPDTPKPFPDGLLEVAFSSVNFAYSGREELLTDFSLNL
EKGKVTALVGHTGAGKSTVANLMQRYYDVTTGAVTFNGIDVREMDLVDLRMHIGVVAQDP
FLFDGTVRDNLLLAKQEATDADLIESLKGASAWEFVSNLPDQMDTRIGERGIRLSMGEKQ
RLTIARVVLRNPPLVILDEATSSVDTITEAKIQQAVGNLVKERTTLVIAHRLSTVRQADQ
IVVLEKGRIIEKGSHDELIGGEGHYARLWQTQTDLIAEDAFKNC
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgatttggagagtttctggctacttgttccgctacaaggcgatgttttggatg
accattgggctggccattacaagtacgctatttgtaatggtgatccccttggtcacgcgt
tatgtgatcaacgaagtattgcctgagaaagagatgggtaatttatggttggccatttgc
gccatagcaggctgctttttcatgcgcgagcttttcaattcatttcgtatacgcttaaac
aatacactggagcaaaaggttctcattgatatccggaaagacttgcatgacaaattgatg
gaattgcccatcggctatttcgatagtcgcaagtcgggagacattgcctcgcgagtgata
gaggacgtggaatcggtcgaacgggtaatcctcgatggaacggagcaagggagtacggct
atattgaccgttcttggagtggctagcatcatgttttacttcgagccgactttagcgaca
ctgatgatcttgcccatccccataatgttggtcatgcagcactttcattttcgcgctcaa
ggcaagaattggcgcaaggtgagggctgcagcgggtgagcttaattcgcttttgattgaa
gacatacagggcaatcgcttgatcaattcctttgcccttaagaaccaggagaaaaagcga
tttcaagaacgtctctcagagctcaaaaaacgcacgcttatatcgatgtatcgctggtca
atccacggccccataacgaatttcgtagtcagcttgggaacggtagcagtggtgggatac
gggggctatttgtttgcaacagaacccgaacgtttcggtacaggggatcttttaatgttc
ttccagctggggggcatgctttacatgcctttgtctcaattaaatgggcttaataatctg
ctagccacgggaaaagcctccagcgagcgggtattcgagatgctcgactatcccgtagaa
atcacaaatccggatactccgaaaccttttccagatgggctccttgaagtagcgttcagc
tcggtcaactttgcttacagcggccgagaagaattgctgacggatttctctctgaatctg
gagaaagggaaagtgaccgcactggtgggtcacacgggagccgggaagtcgaccgtggcc
aatttgatgcagcgatactacgatgttacgactggggcggtgacgtttaacggcatcgat
gttagggagatggatctagtcgatctgcggatgcatattggggtggtcgcccaggatccg
tttctgttcgatggaaccgttcgggacaacctattgctggcgaagcaggaagctacggac
gcggatttgattgaatcccttaagggtgcgagtgcatgggaattcgtttccaatcttccc
gatcaaatggatacacgcattggagaacgcggaattcgactcagtatgggagagaagcag
cgtcttacaatcgcaagggttgtattgaggaatccaccacttgtaattcttgatgaagcg
acatcaagtgtggataccattaccgaagcaaagatccagcaggcggttggcaatctagtg
aaagagcgaacaactctggtcattgcccaccggctctcaactgtgcggcaagctgatcag
atcgtagttttggagaagggtcgcattatcgaaaaaggttctcacgatgagctcattggc
ggggagggacactacgcccggctctggcagacccaaaccgatcttattgcggaagacgct
ttcaagaactgctag
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