Candidatus Pelagisphaera phototrophica: GA004_04040
Help
Entry
GA004_04040 CDS
T09061
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00362
Benzoate degradation
ppht01100
Metabolic pathways
ppht01120
Microbial metabolism in diverse environments
ppht01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
GA004_04040 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
GA004_04040 (pcaH)
Enzymes [BR:
ppht01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
GA004_04040 (pcaH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
QXD32894
LinkDB
All DBs
Position
complement(891801..892499)
Genome browser
AA seq
232 aa
AA seq
DB search
MNSFTPKDPESHPPLIHPLYKSSTTRSPTKDPVIVPQTITELTGPAFDYSSLPDHSADLT
MNGRKAGEPIGERIIVTGRILDENEDPISGAMVEIWQANAAGRYVDREDQHHAPKDPNFL
GAGRIITGDDGWYRFLTLRPGAYPWGNHSNAWRPPHIHFSIFGPNIMTRLITQMYFEGDP
LLKHDPIYGGASEEACVRMIADFSLEHTEEGFALGYLWDIVIRGPKSTPFED
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaattccttcacacccaaggatccagagagtcatccgcctcttattcatccgctttac
aaatcgagcacaacgcgtagtccgaccaaggatccagtcattgtcccgcagacgattacc
gaattgacgggtcccgcattcgactactcatcgcttcccgatcacagcgctgatctcaca
atgaatggtagaaaagcaggtgaaccgatcggagagcggattatcgtaaccggtcgcatt
ctcgatgagaacgaagaccctatttcaggcgcgatggtagaaatctggcaggctaatgca
gcgggcagatacgtggatcgcgaagaccagcatcacgccccaaaggatccaaactttctt
ggggcaggtcgaataataacgggcgatgatggttggtaccgctttttaacccttcgcccg
ggcgcttatccctggggaaaccactcgaacgcctggcggccaccccatattcacttttct
atatttggccccaatatcatgactcgtttgatcacgcagatgtatttcgaaggcgaccca
ttactgaaacatgatccgatttatggtggcgcgtccgaagaagcgtgcgttagaatgatt
gccgacttttccttggagcacaccgaagaagggtttgctctagggtatttgtgggacatt
gtaatacgcggtcccaagtcaactccgtttgaagattaa
DBGET
integrated database retrieval system
