Candidatus Pelagisphaera phototrophica: GA004_05525
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Entry
GA004_05525 CDS
T09061
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GA004_05525
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppht02000
]
GA004_05525
Transporters [BR:
ppht02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
GA004_05525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
TniB
AAA_29
Mg_chelatase
nSTAND3
AAA_16
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
QXD33842
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Position
1255553..1256383
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AA seq
276 aa
AA seq
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MLLDVQDLKVSFHSLDGVNEAVKGISFQLDEGKTLAIVGESGSGKSVTSMALTKLLPPEP
QCRVSGKASLDGENLLDLSASEMRAVRGKQIAYIFQEPSTSLNPYYTVGNQIAESIKFHR
REVSDVWAEVVKLLDQVGIHDPEKRAVDYPHQMSGGMKQRVMIAIALACQPRILVADEPT
TALDVTIEAQIINLLKDLRTRLNMSIILITHNFGIVDEFADDIAVMFRGEIVEAGPAESV
LSNPQHPYTQALINCIPKLGIKQKRLPVVDYAELEK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgttattggacgttcaagatctcaaagtatcgtttcattccctggatggggtgaatgaa
gcggttaaaggcatatccttccagttagacgagggtaagaccctagctatcgtgggagag
agcggtagcggcaagagtgtgacatccatggctctgacaaagctgctgccgccggaaccg
caatgccgcgtttcggggaaagcctctctggatggggaaaaccttttagatctctcggct
agcgagatgcgggcggtgcggggaaagcaaattgcctatattttccaggaaccttcaacg
tcgttgaatccttactacactgtgggaaatcagattgcggagtcgatcaagttccaccgc
agggaggtttccgacgtttgggcagaagtggtcaaactgttggatcaggtaggcatacac
gatccggaaaagcgggcggtggactatcctcatcaaatgagcggtggaatgaagcagcgt
gtcatgattgccatcgccttagcctgccagcctagaattctcgttgccgacgaaccgaca
acggcactcgacgtcactattgaggcccagattatcaatctactcaaggacctccgcacg
aggctcaacatgtccattatcttgattacgcacaattttggaatcgttgacgagtttgct
gacgatatagcggtgatgtttcgcggggaaattgtagaagcgggcccggctgaaagtgtt
ttatcgaatcctcaacacccctatactcaggcactgatcaattgtattccaaaattaggg
attaagcaaaagcgattgccggtggtggattacgcggaattggaaaagtga
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