Candidatus Pelagisphaera phototrophica: GA004_06020
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Entry
GA004_06020 CDS
T09061
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
ppht
Candidatus Pelagisphaera phototrophica
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GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA
AAA_3
AAA_16
HTH_50
Mg_chelatase
HTH_28
bpMoxR
AAA_7
MerR
Motif
Other DBs
NCBI-ProteinID:
QXD33262
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Position
1369708..1371216
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AA seq
502 aa
AA seq
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MTVERILILDDELVIRKALEEQLRRKRLSVCSVSNLSEAEKHIQKDEFDLLFVDVHLPDG
NGTELLDRIATMQDPPLVVIITGNGTVESAVECMRAGAFDYIIKPFSSSQIDVLMKKAKD
YRQLVKVNQFFAKESVEGAELIGKSVPIENLRSMVGKVAPTEATVLINGENGTGKELVAS
ELYRRSSRRKAPFIKVNCAAISESLIESEFFGHEKGAFTGAIQRREGRFELADGGTILLD
EISEISPKVQAKLLRVLQEREFERVGGNKTIKVDVRVVATTNRDLMKSVERGDFRQDLYY
RLNVFPIHVPPLRERQGDVLLLAKTFAQKFARKHGITLRGFEEAASRSLSSHPWPGNVRE
LQNTIERAVILSESGLKISADSLGLMPVMANVNVPAFRETVATPEPVGVGAGSTGYGGSN
QVGFPPSTPTSSSTFSSESSVPDFGDEPLPLEQIEKQHILSTLETTKGNRTHAAKILGIS
IRTLRNKLAIYREDGEFIAGEE
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttgaaagaatactcatcttggatgatgagcttgtgattaggaaagctctcgag
gagcaactaagaagaaaaaggctctctgtttgtagcgtttcgaacctgagtgaagcggag
aagcacattcaaaaagacgagtttgatctcttgtttgtggatgttcatctgccagacggg
aacggcacggagttgctagatcgaatcgcaacaatgcaggatccgcctcttgtcgtgatc
atcacaggaaatgggaccgtagaatctgcggtcgaatgcatgcgggcgggtgcgtttgac
tacatcattaagccattttcgtcatcgcagattgatgtcctgatgaaaaaggccaaggac
tatcgccaactcgttaaggtgaatcagttctttgcgaaagaaagcgtagagggggctgaa
ctaatcggcaaaagtgtgccgatcgagaatttgcgatctatggtcggcaaggtagctcca
acggaagccaccgttctgatcaatggagagaacggaaccggaaaggagctggttgcgagt
gagctttaccgcagaagtagtcgccgaaaggctccttttatcaaagtcaattgtgcagcg
atttccgaaagcttgatcgaaagcgaattcttcggtcatgaaaagggggcttttacaggt
gccattcagcggcgcgaagggcgttttgagctggcggatggcggaaccatactgttggac
gaaattagtgagatatcgccaaaggttcaggccaaactgctccgtgtcttgcaagaacgt
gagtttgaacgagttggaggcaacaagacgatcaaagttgatgtgcgagtggttgcgaca
accaaccgcgatctgatgaaatcggttgaaagaggggactttcgacaagacttgtactat
cgattgaatgtatttccgattcacgtcccaccattgagagagcgacaaggagatgttctg
ttgctcgctaaaacgtttgcacaaaaatttgctcgaaagcatgggataactttgaggggc
tttgaggaagcagcgtctcgttctctgtcttctcatccttggcctggaaacgtcagagag
cttcaaaatacgattgaacgagcggtcattttatccgaatctggattaaagatttccgcg
gattcccttggactgatgccggtgatggccaatgttaacgtccctgcctttcgcgaaaca
gtagctactcctgagcccgttggggtgggcgccggttcgacagggtatggaggttcgaat
caggtaggatttcctccctcgactccaacgtcctcatcaaccttttcttcagaatcgagc
gtgcctgatttcggtgatgaaccgcttcctttggagcagattgagaagcagcacatcttg
agtactttggaaaccaccaaaggaaatcggactcatgcggctaaaattctcggaatcagt
atcaggacattgagaaacaagctcgcgatttaccgtgaggacggagagttcattgccgga
gaagagtag
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