Candidatus Pelagisphaera phototrophica: GA004_06120
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Entry
GA004_06120 CDS
T09061
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht02010
ABC transporters
ppht02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GA004_06120
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
GA004_06120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppht02000
]
GA004_06120
Transporters [BR:
ppht02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
GA004_06120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_6
GH123_N
Motif
Other DBs
NCBI-ProteinID:
QXD33282
LinkDB
All DBs
Position
1394505..1395494
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AA seq
329 aa
AA seq
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MQSHLIALFLVPFLFGSIPIYGQNDSKELSIAVVPKGTDKERWKAIHAGALKASEELSAE
GVSVRILWKGDNAAARDKQIQVVDTFTGQRLSGILVASLDESQFAGNIRFDRESDLPMVY
IESGLDADRPISYVATDNFQGGSIGAERIGQLTEGVGNVILLRHRQGDSNAEAREAGFIE
KIKTSYPSIRLISIDQYSGDSMSQADEASEYLLNRYGRRVNAVFASSVTGTNSMLNALRN
FNLAGQVFLVGYDASNASLDAIKTGEIQGLVITNPFRMGYLGVSTLVDYIQGGNMPTMVD
AGVTLVTMANIESTEVQEVLGLNKTEAVR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcccacttgatcgctctttttctagttccgttcctttttggatcgattccaatc
tatgggcagaatgattcgaaagagcttagcattgcggtcgttccaaaggggaccgacaag
gagcgatggaaggcgattcacgcaggggcgctgaaagcaagcgaggaactgtctgccgag
ggtgtgagcgtcaggattctctggaaaggagacaacgcggcagcacgtgacaagcaaatc
caagtagtggatacgtttacgggtcagcgattgagtggcattctggttgcatctctggat
gagagtcagtttgcaggtaatatccggtttgatagggaatcggatttgccgatggtttac
atcgagtctggattggatgcggatcgacctataagctacgtagccacagataattttcaa
ggtggcagtataggcgccgaacggatcggtcagcttacggaaggcgtgggcaatgtgatt
ttgctaaggcatcgtcaaggcgactccaacgctgaggctcgagaagcagggttcatcgag
aaaatcaagacgagctatccctcgattcgactgatctcgattgatcagtattctggggac
tcgatgagccaggcggatgaagcttctgagtatttgctaaaccgctacggtagaagggtg
aacgccgtttttgcgtcgagtgtcacaggcacgaactctatgttgaatgcgctgcgaaac
ttcaatttggcaggacaggtatttcttgtggggtacgatgcttccaatgcttcccttgac
gctatcaagactggggagattcagggactggtaatcacaaatccctttcgtatgggttat
ctcggagtgtctacattagtagactatatccaggggggcaatatgccaaccatggtcgat
gcgggtgtcacactggttacgatggcaaacatcgaaagcacagaggtgcaggaagtatta
ggtctgaacaagactgaagcggtacgttag
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