Candidatus Pelagisphaera phototrophica: GA004_06600
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Entry
GA004_06600 CDS
T09061
Symbol
rsmH
Name
(GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppht03009
]
GA004_06600 (rsmH)
Enzymes [BR:
ppht01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
GA004_06600 (rsmH)
Ribosome biogenesis [BR:
ppht03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
GA004_06600 (rsmH)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_5
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_12
FtsJ
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
QXD33853
LinkDB
All DBs
Position
1499371..1500288
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AA seq
305 aa
AA seq
DB search
MEGHVPVLSQETLTFLDPKGGGVYLDCTFGGGGHTRMILEAADTSVVALDQDPQAIERAD
QFTQEFGDRFQFRRMNFANLENLEEGPFDGILFDFGVSSFQLDQLDRGFSFRGEAPLDMR
MNPETGISAADWLASASRRELIQAIRAYGEEKNWRRIVDAIIEARTQSPLKATQDLSELI
LSCTPARLRFASKIHPATKTFQGIRIAVNNEIDVIEVGLPAAFKRLKPNGRLCVISFHSL
EDRIAKNLFRRWAGRPEPGDNRPQDMREVKAELLTRRPAVAGDAEVAVNSRSRSAKLRVL
RKAES
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcacgttccagtactttcgcaagaaacgctgacttttctcgatcccaaaggc
ggaggggtctatctggactgcaccttcggtggtggaggccacacgcggatgatcctagaa
gcggccgacacaagcgttgttgctctggatcaagacccgcaagcaatcgagcgagcggat
caatttactcaagaatttggcgaccgatttcagtttcgccgcatgaatttcgcaaatctg
gagaatttagaagaggggcccttcgacggcatcctatttgactttggagtctcctctttt
caactcgatcagttagatcgtggcttttcctttagaggagaagctccccttgatatgcga
atgaatcccgaaacggggatttcagctgctgactggctcgcgtctgcgagtcggcgagag
ctgatacaagcaatccgcgcttacggagaagaaaaaaactggcggcgcatcgtcgacgct
atcatcgaagccaggacccagtcaccactcaaagccacccaagacctgtcggaacttatc
ctatcctgcactccggcaaggctgcgttttgcttcgaaaatccatcccgctacgaaaacc
ttccaagggattcgaatagcggttaataacgagatcgatgtcatcgaagtcggactccca
gctgcgttcaagcggttaaagccaaacggcagattgtgtgtgattagctttcattcgttg
gaagatcgaatcgcaaagaatctgtttcggcgatgggcgggacgaccggagccgggagat
aatcggccccaagacatgcgtgaagtaaaggcggagttgcttacccgccgcccagcagta
gccggtgatgcggaagtcgcggtaaattcgcggagtagatccgcgaaactcagagtgcta
aggaaggcggagtcgtga
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