KEGG   Candidatus Pelagisphaera phototrophica: GA004_06655
Entry
GA004_06655       CDS       T09061                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
ppht  Candidatus Pelagisphaera phototrophica
Pathway
ppht00470  D-Amino acid metabolism
ppht00550  Peptidoglycan biosynthesis
ppht01100  Metabolic pathways
ppht01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:ppht00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    GA004_06655
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    GA004_06655
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    GA004_06655
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppht01011]
    GA004_06655
Enzymes [BR:ppht01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     GA004_06655
Peptidoglycan biosynthesis and degradation proteins [BR:ppht01011]
 Precursor biosynthesis
  Amino acid ligase
   GA004_06655
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 ATP-grasp_4 RimK TTL ATP-grasp CPSase_L_D2 ATP-grasp_5 ATPgrasp_Ter
Other DBs
NCBI-ProteinID: QXD33382
LinkDB
Position
1513808..1514740
AA seq 310 aa
MKNEPVVAVVCGGTSAEREISLSSGLAVAEAFGSLFEVERIELSEESVPVQLNKKRHVVF
STLHGTFGEDGAFQSLLEVEGIEYAGCDVRSSQLTFDKVKTKSVLSDVGIPVADQIAFHR
HSPPDPGEAIEKLGPAVVLKPVKQGSSIGLGFANSVEELESLLSDLKFDDWMLESMIVGK
ELSVGVLDGKATEIVEIRPRSGQYDYESKYTKGLTEFVVPAPLSAELECEIKEIAERTFE
ACGCRDYARVDLMFSQSNYPFVLEVNTLPGMKETSLLPMSAAAAGINFKALLKKLVEPAF
LRFYSKYSVC
NT seq 933 nt   +upstreamnt  +downstreamnt
atgaaaaacgagccagtagtggctgtggtttgcggaggaacgtccgcggagcgggaaatt
tcattaagttcaggcctggcagttgctgaagcgtttgggtcgctcttcgaggtggagcga
atcgagctgtcagaggagtctgtccccgtacaactgaataagaagcgacatgtggtgttt
tccaccctccatggaacgttcggagaagatggtgcttttcagtctttgttggaggtagag
ggaatcgaatatgcgggatgcgatgtgcggagcagccagctcactttcgacaaggtgaag
acaaagtcagtgctgagtgatgttgggattccggttgcagaccaaatagcctttcatcgc
cattcgcccccggatccgggagaagcgattgaaaaattggggccggcagtcgttctgaaa
ccggtgaagcaaggaagcagcatagggctcggttttgcgaattcggtcgaggagctggaa
agtttgctttccgatctcaagtttgatgactggatgctggaaagtatgatcgtagggaaa
gagctttcggtaggcgtgctggacgggaaagcgaccgaaatcgtcgagattcgacccaga
tcggggcaatacgactacgagagcaagtatacaaaggggttgaccgagtttgttgtaccg
gcgccactttcggcagagctggaatgtgagataaaagagatcgcagagcgaacgtttgag
gcctgcggctgtagggattatgctagggtagacctgatgttcagccaatcaaattaccca
tttgttctggaggtgaacacccttccggggatgaaggaaacgagtcttcttcccatgtca
gcagcagcggcggggataaatttcaaagctctgttaaaaaaattagtagagcctgcgttc
ttgagattttattctaagtattcagtctgctga

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