Candidatus Pelagisphaera phototrophica: GA004_06725
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Entry
GA004_06725 CDS
T09061
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GA004_06725
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppht02000
]
GA004_06725
02044 Secretion system [BR:
ppht02044
]
GA004_06725
Transporters [BR:
ppht02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
GA004_06725
Secretion system [BR:
ppht02044
]
Type I secretion system
Adhesin protein transporter
GA004_06725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
Peptidase_C39
SMC_N
ABC_ATPase
AAA_29
Dynamin_N
Zeta_toxin
DUF87
AAA_22
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
QXD33396
LinkDB
All DBs
Position
complement(1526709..1528940)
Genome browser
AA seq
743 aa
AA seq
DB search
MHTTEINRLANQTRSPANQIAETVDDSLREDAFALEASRVDDPLLECLVTLGKIHHKPLS
KEALISGLPLVDNQLTPKLFLRSASNAGFSARIVNRSFKAIPSLTLPAVLILKENRAMIL
VSKNQDGECRVILPETGSGESTIQATDIEREYAGVAIFVKPEFDFDTHADSSTETIDAKN
WFWGTLWKYRKIYANVLLAAVFINVFAIAGSLFVMNVYDRVIPNNAIDTLWVLASGVCIV
YVFDFLMKSLRGMLIDKAGKNADILMSTFIFQRIMGIKMQSKPNSAGSFANQVKGYESLR
EFFTSASLTTIIDLPFVCLFLIFMGYIAGWIAFIPCVAILLILGLGCLMHIPLKRAAVKS
HGAGAQKHAILVEAINGFEAIRGLSAAGSFQKRMEDCLGKTARSEVISRRYSSIASNFTI
FITQMVSVVIIVVSVFQIQAGDMSMGALIGCMILTGRAMAPIGQVAALLSRLQGSIVSLS
GLNDLIKLPQEREEGRDYVRKPDFEPRIEFSNVTFSYNPESAPAIINASFSIKPGERVAI
LGRVGSGKSTLLRLILGFYPSSGGMITINDTDIRQIDPADLRRRLGYIGQDNLLFQGTLK
SNIIIGAPWMDEAAVLEAAKLSGVERFASRHPLGYDLQVGERGELLSGGQRQAVNIARAL
LAKPSLLVMDEPTCAMDANAERDFISNMEKYSKDGNRTLILSTHKPSMLKLADRIIVMDQ
GKVAADGPKADVLRQLSGGAGKN
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcatacgacggaaattaatcgcttagcgaatcagactcgatcacccgccaatcaaatc
gccgagacagtcgatgattcactgagagaggatgctttcgcactcgaggcttcaagggtc
gacgatccacttttagaatgccttgtaacacttggaaagatccaccacaaaccactttca
aaggaagcccttatttcgggtttgccgctagtggacaatcaattaactccgaagcttttt
ctccggtctgcatctaacgccggattctctgcccgtatcgtaaatcgttcattcaaggca
attccttctctcactctcccagccgttctcattctgaaagagaatcgtgcaatgattctc
gtttccaagaatcaagacggagaatgcagggtcattctgcctgaaacaggaagtggcgaa
tcgaccatccaagcgacagacatcgaaagggagtacgcgggtgtcgccatttttgttaag
ccagagttcgacttcgacacccatgcagattccagcactgaaacaatagacgctaagaac
tggttttggggcactctttggaaatatcggaaaatctatgcgaacgtactgctcgctgcg
gttttcataaatgtattcgcgattgcaggatcattgttcgtgatgaatgtctacgatcgt
gtgatacccaacaatgcaatcgacactctctgggttctagcaagcggagtgtgcattgta
tacgtctttgattttctcatgaagtcacttcgagggatgctaatcgacaaggcgggtaaa
aacgccgatatattgatgtcaaccttcattttccaacgtatcatgggcatcaagatgcag
agtaaacccaattctgccggcagtttcgccaatcaggtaaagggatacgaaagtttaagg
gaattcttcacctcagcctctctgaccacgataatcgacttaccattcgtgtgtttgttc
ttgatattcatgggatacattgccggttggattgcatttataccctgcgtagccattctt
cttatactgggactaggatgtttaatgcatatccctctaaaacgagctgccgtaaaatcc
catggtgcaggggctcaaaagcacgcgatcctagttgaagctatcaacggattcgaagcc
attagaggcctttccgctgccggcagctttcagaaacgaatggaggactgccttggcaag
acggctcggagcgaagtcatttcccgtcgttattcctcgatcgcttccaattttacaatc
tttatcacccaaatggtttcagttgtgatcatagttgtgtcagtatttcagatacaggca
ggcgacatgagcatgggtgcgcttatcggctgtatgatcctcacagggcgggctatggca
cctatcggacaagtagcggctcttctttcaaggctgcaaggctcgatagtctcactaagt
ggattgaacgatctcattaaattaccccaggaacgagaagagggccgtgattatgtaaga
aaacctgatttcgaaccacgaatcgaatttagcaacgtgaccttctcctacaatccggaa
agcgctcctgcgatcatcaatgcttcctttagcattaagccaggagaacgcgtagcgatt
ctaggaagagttggatccggaaaaagtaccctactgcgcctcatccttggattctatccc
tcctcaggcggaatgatcacgatcaacgataccgacattcggcaaattgatcctgcggat
cttagacgtaggctcgggtatattgggcaagataatcttttattccaagggacccttaag
agcaatatcatcatcggggctccgtggatggatgaagctgcagtactcgaggcagccaaa
ctctctggagtcgaacgcttcgcctccagacatcctctaggctacgacctacaagtaggc
gaacgtggagaactcctttcaggaggacaaaggcaagccgtaaatatcgctcgcgccctc
ctggcaaaacctagcctgctggtgatggacgaaccaacttgcgctatggatgcaaacgca
gagcgagactttatttcgaatatggaaaaatactcgaaagatggaaaccgcaccttaatt
ctatctacacacaaaccctcaatgctgaaactggctgatcgaattatcgttatggatcaa
ggcaaggtagctgctgacgggccaaaagcagatgtgctgcgccaactttccggaggagcg
ggcaaaaactga
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