Candidatus Pelagisphaera phototrophica: GA004_07100
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Entry
GA004_07100 CDS
T09061
Name
(GenBank) GspE/PulE family protein
KO
K02652
type IV pilus assembly protein PilB
Organism
ppht
Candidatus Pelagisphaera phototrophica
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppht02044
]
GA004_07100
02035 Bacterial motility proteins [BR:
ppht02035
]
GA004_07100
Secretion system [BR:
ppht02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
GA004_07100
Bacterial motility proteins [BR:
ppht02035
]
Pilus system
Pilus assembly proteins
GA004_07100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_22
AAA_23
AAA_19
AAA_16
AAA_5
DEAD
AAA_14
cobW
AAA_30
AAA_11
AAA_29
nSTAND3
NTPase_1
ResIII
AAA_7
TK
Motif
Other DBs
NCBI-ProteinID:
QXD33462
LinkDB
All DBs
Position
1621928..1623613
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AA seq
561 aa
AA seq
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MFESRNAAILDLCRSYELVDESILENLSASSEELERSVASLLVDQGHVSKKDLLDRVARF
LSFEYRAEIPPDIPNEVVSQLSIDLARMYGVVPIESLDTVIIIAASDPFNDHLVDDLSFA
VGKEVQIVVADPKTIGELIDVYYRLGDVDYKGILEEIDIGSVEDEEVSLENLLNMAGETP
IIRFVNLVLSQAIRDKASDVHFEPFENEFKIRYRIDGALYEMSPPPRELAIPIISRIKVI
GNLNIAERRVPQDGKVRLTVAGRSVDLRISTLPTQFGESVVLRVLDQSATTLELDSLGMP
PDIVEVVAKTIALPNGIFIVTGPTGSGKTTTLYSCLKRLNQVGNKLMTAEDPIEYEIDGI
MQTAINSTIDLTFANALKAFLRQDPDIIMVGEIRDLETAQIAIQASLTGHLVLSTLHTND
AAGAVTRLMDMGIEEFLIASSIEAVLAQRLLRRICMDCRREHMPSVALIEQLELDPEMLA
NRQIYAGRGCDNCAKTGYRGRLGIFEILEITESIRELIAAGEPSGMIRDRAIQQGMRTLR
EDGLRSIFTGATSVEEVIRYT
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaatcaagaaatgccgccatattggatttgtgccgctcttacgagctggttgac
gagtcgatattggagaacctgagtgcctcttcggaggaactggagcgttccgttgcgagt
ctgttggtggatcaagggcatgtgagcaagaaggaccttctcgatagggtagcccgtttc
ctaagctttgagtatcgagcggaaatcccgccagacattcccaacgaagtcgtttctcag
ctcagcatagatttggccagaatgtatggcgtcgtgcctattgaatctttggatacggtt
ataattatagccgcttccgatccgttcaatgaccacctagtggatgacttgtcctttgct
gtgggcaaagaggttcaaatcgtggttgcggatcccaagacgattggggagttgatcgat
gtgtattaccgacttggtgacgtagattacaaggggatactggaggaaatagatatagga
agcgtagaagatgaggaggtgtctcttgagaatctcctcaatatggctggggaaaccccc
atcatccggtttgtcaatcttgtcctttcacaggcgatacgcgacaaggcctcggatgtt
catttcgagccctttgaaaatgaattcaaaattcgttacaggatcgacggcgctttgtac
gaaatgtctccgccaccgcgagaattggcgattcccataatttcgcgaatcaaggttatt
ggaaatcttaacattgcggagcgccgtgtgccacaagatggaaaggtgcgtttaaccgtc
gctggtcggtcggtggatcttcggatctctaccttgccgacacagtttggggaaagcgtc
gttttgcgggttctggaccaatcggcaaccacgctggagttggatagcctcggcatgcct
cctgacattgtggaagtggtagcgaagacgattgctcttcccaatggcattttcatcgta
acggggccgacgggttctggcaagacgacgactttgtacagctgtctcaagcgcctaaac
caagtcggtaataagcttatgaccgccgaggatccgattgagtacgagatcgatggtatc
atgcagactgccatcaactcgaccatcgatctcacgtttgcgaatgccctcaaggccttt
ttgagacaggatccggacatcatcatggtcggcgagattcgagatctcgagaccgctcag
attgcgatccaggcatcattaaccggacacctcgtgctgtcgactctgcatacgaacgat
gcggctggagcggtcacccgtttgatggacatgggaattgaggagtttctcattgcttct
tcgattgaggcggtactcgctcagcggctgttgcggcggatttgtatggattgccgtcgt
gagcacatgccgagcgtggctctgattgagcagcttgaacttgatcctgagatgcttgcc
aatcggcagatctatgccgggcgcggatgtgacaattgcgcgaagacgggctaccgaggt
cggttggggattttcgagattttggaaattacggagtcgattcgcgagttgatcgcggca
ggcgaaccctctgggatgatccgggatcgcgcgatacagcaagggatgcgtaccttgcgg
gaagatgggcttcggagcattttcacgggtgctacctccgtggaagaggtgatacggtat
acttga
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