Candidatus Pelagisphaera phototrophica: GA004_07105
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Entry
GA004_07105 CDS
T09061
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
ppht
Candidatus Pelagisphaera phototrophica
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppht02044
]
GA004_07105
02035 Bacterial motility proteins [BR:
ppht02035
]
GA004_07105
Secretion system [BR:
ppht02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
GA004_07105
Bacterial motility proteins [BR:
ppht02035
]
Pilus system
Pilus assembly proteins
GA004_07105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
Motif
Other DBs
NCBI-ProteinID:
QXD33463
LinkDB
All DBs
Position
1623622..1624896
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AA seq
424 aa
AA seq
DB search
MKFEFIALDSGGEERRGMVEAPSRELASTQIKSYGLIPAKVTPVKAKSRKASTSGGGGLT
VRGDRREIVKKPLYFGAAIGGKGLAIFTRQLSTLLQNGLSLIKSLEVLVAQERNPAFKWV
LSQQLENIRSGNTFSEGLAQHKKEFDALYLNMVKAGEASGTLDMALGRLAHYLTKARQIR
SKVTQASIYPIVVFSFSLLIVLGLMTFVVPKFAAIFDKQLNGEQLPVLTRIVMNLSQFIT
SNIVGILVGLVVAFLLFTGFRSTRAGAVFFAFVKLNLPLIKDTFSKIYVSRFCRTLGTLL
ESGVPILEALNYSRAAVGNRFIMNAVDKVRNRVRDGEPLSKPIEATGLFPPMVSSMIEVG
EETGELPNMLNQIAEIYDEEVDASISSVTSVIEPILILMLAISVLVIAISLFLPFIKLMQ
NIAQ
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgaatttatagcattggatagtggaggggaagagcgccgcggcatggttgag
gcacccagccgggagttggcgtctactcaaataaagagctatggattgattccggcgaag
gtgacgccggtaaaggcgaaatcccggaaggcaagcacgtcgggaggtggcggattgacc
gtgcggggcgaccgtcgggaaatcgtcaagaaaccattgtattttggagcggctatcggg
ggtaagggactcgccatctttactcgacagctttcgacgttgttgcagaatgggctctcg
ttgatcaagagcctcgaggtgctagtcgctcaggaacggaatcctgccttcaaatgggta
ctgagccaacagctggagaatatccgctccggaaacacgttctcggaggggcttgcccaa
cacaaaaaggagtttgacgcactctatttgaacatggtcaaggcaggagaagcgagcggg
actctagatatggctttgggccgcttggctcactatctgacgaaagcgcgtcaaattcgc
tccaaggtgactcaggcatcgatctatccaatcgttgtattcagcttttcattgctgatt
gttttgggtttgatgacgttcgttgtcccgaaattcgctgccatattcgacaagcagctc
aatggtgaacagcttccggttctgacgcggattgtgatgaacttgagccagttcatcacc
tcgaatattgtgggaatactagtcggtctggtcgtcgcctttctactttttaccggattt
cgttcgacccgcgcgggggcggtcttttttgccttcgtcaaattgaaccttccgctaatc
aaggataccttctcgaaaatctatgtttcccgcttctgtcgcactttgggcacactgctg
gaaagtggcgttccgattctggaagcactgaactactctcgggcggccgtgggaaatcgg
tttatcatgaacgcggtggacaaggtgagaaatcgggttcgcgatggtgaacctctctcg
aaacccatcgaggccacaggattgttcccgccgatggtttcgagtatgatcgaagtagga
gaggaaaccggagagctgccgaacatgctcaaccagattgctgaaatttacgacgaggag
gtggatgcctccatttcgagtgtcacctcagtcatagagcccattcttatcttgatgttg
gcgatcagtgtcctagtaatcgcgatttccctctttctgccattcattaagttgatgcag
aacatcgcccagtag
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