Candidatus Pelagisphaera phototrophica: GA004_07165
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Entry
GA004_07165 CDS
T09061
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
ppht
Candidatus Pelagisphaera phototrophica
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppht02000
]
GA004_07165
Transporters [BR:
ppht02000
]
Other transporters
Pores ion channels [TC:
1
]
GA004_07165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
QXD33473
LinkDB
All DBs
Position
complement(1639752..1641974)
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AA seq
740 aa
AA seq
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MIRNFCFLLPGIYLAALQTFGQANERVSTVDLDARIITASPFVEKKAELVNSAGELSGDA
LRRSSESSLGGTLSGQAGVHSTYFGPGAGRPIIRGFDGDRIRILNQDLDTFDVSNSSPDH
GVSIEPLFADEIEVVRGPATLLYGNAAIGGVVNVLSKELPRKRAFAPISGQAEAYYGSVS
DEQSYGVSLQGGEGDFAWSAGFLDRQSNDFEIPGFAESIYQMEAEEEEHHDEEEHHDEEH
EEGEEHEDEHGDEEEEEVFGVLENSFVDTRTGYLGLAWFGDKGSLAISYTDYASDYGVPG
HAHGHEDEHGHEEGEEHEEGEEHEEEEHHDEDEHGDEESVKLDLDQSRFTLRGELIDPFD
FLKSLEIDFALGDYQHVEVEGNEVGTLYERDGYELRLTGVHNPVGEFTGAYGFQAKVDDF
LAVGEEAFIPNSKTSQYGLFIMERLNQNWGAWEFGGRVESIEIDPEDSSLEKRSFETLNG
SFGFVRRIDESSTFSANLVLAERAPNATEIFAFGPHVGTRTFEIGKASIDEEFSTSLDMS
YRLTAGKITGEVSAFYSDFTNFIYLQFLDHEEVESIYGEDFDTEGLNVFRATAADAKFYG
FEVDLRYHIIDEADQAMHLDLVYDQTRATNKSFGNNMPRIPVRRLGLRYEYQNNDWLFGL
EGRWYDEATNLAPNALPTDSYTLLNANVSYRIRASETVSVDLFAAGHNLGDEEARPNTSF
LKDLAPMPGRSVRLGVRTSF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
gtgattagaaatttttgctttttgcttccaggcatctatctagctgcccttcaaactttt
ggacaagctaacgagagagtcagtacggttgacctagatgcaaggatcatcacagcgagt
ccatttgtagaaaaaaaggccgaactggtcaattctgcaggcgagctatcaggagatgcc
ctcaggcgatcatccgagtcttcattaggaggaactttgtcaggtcaagcgggtgtgcat
tcgacctattttggcccaggagcaggtcgacccatcattcgcggttttgacggcgacagg
atccgtatccttaaccaagatctggataccttcgacgtatcgaattcaagcccagaccac
ggcgttagcattgagccgcttttcgctgacgaaatcgaggttgttcgaggccctgccaca
ttgctttacggaaatgcagctattggtggcgtggttaacgtactgagcaaggaattgcct
agaaagcgggcattcgctcctatttccggtcaggccgaggcctactatggatccgtatcg
gacgagcagtcttacggcgtttctttgcaaggcggtgaaggagacttcgcttggagtgcg
ggattcttggatcggcaatccaacgattttgaaattcccggctttgccgagtccatctat
caaatggaagccgaagaggaggagcatcatgatgaagaggagcatcatgatgaggagcac
gaagaaggagaagaacacgaggatgagcacggcgatgaggaagaagaggaagtgttcggc
gttttggaaaacagctttgttgatacacgtaccggctacctcggcctagcttggtttgga
gacaaaggcagcttggccatttcttacaccgactacgcttccgactatggagttccgggt
catgcccacgggcacgaggatgagcacggccatgaggagggcgaagaacacgaagaaggt
gaggagcatgaggaagaagagcatcacgacgaggatgaacacggcgacgaagaatcagtc
aaactcgatctcgaccagtcccgcttcactttgcgcggcgaactcatcgacccgtttgac
ttcctcaagagcctcgagatcgacttcgctttgggcgactatcagcacgtcgaagtcgaa
ggcaacgaagtaggcaccctttacgagcgagatggctacgagctacgcctaacaggcgta
cacaatcctgtgggtgaatttaccggagcttacggttttcaagccaaagtagatgacttt
ttggccgtcggagaagaagcctttataccaaattccaagacatcgcaatatggccttttt
ataatggagcgattgaaccagaattggggagcttgggagtttggtggcagagtggagagc
atagagatcgatcccgaagattccagcctggaaaaacgaagcttcgaaacgcttaacgga
tctttcggcttcgtgcgtcgaatcgatgagagcagcacgttttcagcgaatctagttctc
gcggagcgggctcccaatgctaccgaaatattcgctttcggacctcacgtaggtacaaga
actttcgaaattggtaaggcttcaatagacgaggagttctcaaccagccttgatatgtcc
taccgattgacagctggaaagatcaccggagaggtttccgccttctattctgatttcacc
aactttatttatctgcagttcctcgatcacgaggaagtagaatcgatctatggcgaagac
ttcgataccgagggcttgaatgtgttcagggcaacggcagcggacgccaaattctacggc
ttcgaagtcgatcttcgctatcatataattgacgaggcggatcaagccatgcacttggac
ctcgtttatgatcagacaagggctacaaacaaaagcttcggtaataacatgcctcgcatc
ccagtgagacgccttggcttgcggtacgagtatcagaacaatgattggcttttcggctta
gaaggtcgctggtacgacgaagccactaatctggctcccaacgctttgcccaccgacagc
tacaccctgttgaacgcgaacgtaagctaccgcattcgagcttctgagacagtctctgtc
gatctattcgcagcgggccacaacctaggagacgaagaagcccgcccgaatacttcgttc
ttgaaagacttggctccgatgccaggtcgcagcgttagactcggagtaaggacttccttt
tag
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