Candidatus Pelagisphaera phototrophica: GA004_07570
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Entry
GA004_07570 CDS
T09061
Name
(GenBank) ABC transporter permease
KO
K10440
ribose transport system permease protein
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GA004_07570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppht02000
]
GA004_07570
Transporters [BR:
ppht02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
GA004_07570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
DUF6007
Motif
Other DBs
NCBI-ProteinID:
QXD33545
LinkDB
All DBs
Position
1746895..1748241
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AA seq
448 aa
AA seq
DB search
MRLKTLNFGLGEYGMVLALIGLCVLFSVLTLNRQSGEGIAAERELTKVVLDQFPTEGVVL
VVGAENTSSATMAENVYASVVSANRENVRMVVGGPRDLRDELDGLVAESGGLAGIVTGGD
ASKWLVLEQIEQNYPAFESFEIVVPRERLWPDFLKASNLLAIVERIVVIAIIAIGMTMVI
ITAGIDLSVGSLIALSAVIGATVVKHMGGPEAAGWVVVLGFFAGTISCGLIGMFAGGLVS
RFKVAAFIVTLGIMMMARGLAFMTTGGFSIDQVPDSFVWLAQGRLWGIPNTVILLAVVYS
TAHLFMSHTRYGRYIYAVGGNAEAARLTGVPVGTVIVLVYTVSGLAAGLGGCLQASLVRA
AAPNMANMYELYVIAAVVVGGTSLSGGSGRMFGTLIGAFIIAVIQNGMNLLGIKSYAQMF
TLGAVIVLAVLLDKARQNGGFRRLLRGR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagattgaagactttaaatttcggattgggtgaatatggcatggtgctcgctctcata
gggctctgcgtcttgtttagcgtgttgaccctgaatcggcagtcgggagagggcattgcg
gctgaaagggagctcactaaggttgtgcttgatcagtttccaaccgaaggagttgtcctc
gtcgtaggtgcggaaaacacgtcttcggctacgatggcggagaacgtgtatgcgagtgta
gtttctgcgaacagagaaaatgtccggatggttgtgggtggacccagagacctgcgcgat
gagctggatgggcttgtcgctgagagtggtgggctcgctgggattgttaccggtggagac
gcttccaagtggctcgtattggagcaaatcgagcaaaactatcccgctttcgaatccttt
gagatagtcgtgccacgcgaaagactttggcctgatttcctaaaagcgtccaatctcctc
gccattgtagagcggattgtggtgatcgccatcatagccattggcatgacgatggtcatc
ataacggcgggcatcgatctttccgtcggcagtttgattgcgttgtctgcggtgattgga
gctaccgtggttaagcatatgggtggccctgaagctgcgggctgggtcgtcgttcttggg
ttttttgccggaactatcagttgtgggctcatcggcatgtttgcgggtgggctggtttca
cgattcaaggtagccgcgtttatcgttacattggggatcatgatgatggctcgggggctc
gccttcatgacgacgggtggtttctccattgatcaagtgccggactcgtttgtttggcta
gcgcagggtaggctttgggggattccaaatacagtcattcttttggcagtagtttactca
accgcccacttatttatgtctcacacacgttatggacgttacatatacgcagtgggtgga
aatgcggaagcagctcgtttgaccggtgttccggtgggaacggtgattgtgctcgtctac
accgtaagtggactggccgccggactaggagggtgcttacaagcctctctcgtacgagcg
gcggcacccaacatggccaatatgtacgagctctatgtgatcgctgccgtagtagtgggg
ggaacgagtctatcgggaggttcgggtagaatgtttggtactctaattggtgcgttcatt
atagcggtgattcaaaatgggatgaacctgctcggtattaagagctatgcccaaatgttt
acactcggtgcggtgatagttctcgctgtgctgctcgacaaagcccgccaaaatggaggg
tttcggcggttgttgcgaggaaggtag
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