Candidatus Pelagisphaera phototrophica: GA004_07575
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Entry
GA004_07575 CDS
T09061
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht02010
ABC transporters
ppht02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GA004_07575
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
GA004_07575
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppht02000
]
GA004_07575
Transporters [BR:
ppht02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
GA004_07575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
QXD33546
LinkDB
All DBs
Position
1748480..1749454
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AA seq
324 aa
AA seq
DB search
MNIRNLLSLLLSVPLILLVSCSNPGSGKGSPVTVRGKIGMTCMDLTNPFFKLIANVMEEE
ALKYGYSLVALDGANDGAAQNSQLADFVAQGYDAIFLNPADSKAAAEGVRKAHAAGIPVF
TFDIQIDDSTVGEMVTSHIGSDNFQGGQLAGKSMMKATGNRGKIAIVGLPEVTSCILRVE
GFKDYLKNNGGNLEIVTELNGKGNRNEGFAVTTDILQAHPDIVGIFAINDPSGLGAYAAV
AKANLTDRITIVAFDASPAGKQGVFEKKLFDTPQQFPRKMAEGTVQSFIRHLQGDEVNRS
IFIPCSHYYYETAVNDESRINEQW
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcgaaatctcctttcacttcttctttcggtccctctgattttgttggtatcc
tgctctaaccccgggtcgggaaagggatcgcctgttacggtgagaggaaagattggaatg
acctgtatggacctgaccaatccttttttcaagctcatagctaatgtgatggaagaagag
gcgttgaaatatggatacagccttgtcgcattggatggggcgaacgatggggcggctcaa
aattctcagctagctgactttgtggcccagggctacgatgcgattttcctgaaccctgca
gactcgaaggcggcggccgaaggggtgcgaaaagctcatgctgctgggattcccgttttc
actttcgatatccagatcgatgattccacagtcggggaaatggtgacttcccacattggc
agtgacaatttccaaggagggcaattagcggggaagagcatgatgaaggccacggggaat
cgtggaaagattgctattgttggcctacccgaagtgacttcttgcatcctgcgggtggag
ggtttcaaggactatctcaagaacaatgggggaaatctggagatcgtcacggagctcaat
ggaaaggggaatcgaaatgaaggtttcgcggtaaccacggacatcttacaagctcaccct
gatatagtcgggattttcgcgatcaatgatccctctggtttgggagcctacgccgcagta
gctaaggcgaatctgaccgaccgcattacaatagtcgccttcgatgcctctcctgctggg
aagcaaggggttttcgagaagaagctcttcgacacgcctcagcaatttcctagaaaaatg
gctgaagggacagtccagtcattcatccgccatttgcaaggggatgaggtgaataggagc
attttcataccctgttcgcactactactatgaaacagcggtcaacgacgagagccgtatt
aacgagcagtggtag
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