Candidatus Pelagisphaera phototrophica: GA004_07840
Help
Entry
GA004_07840 CDS
T09061
Name
(GenBank) peptidoglycan glycosyltransferase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00550
Peptidoglycan biosynthesis
ppht01100
Metabolic pathways
ppht01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GA004_07840
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GA004_07840
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppht01011
]
GA004_07840
Enzymes [BR:
ppht01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GA004_07840
Peptidoglycan biosynthesis and degradation proteins [BR:
ppht01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
GA004_07840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QXD33592
LinkDB
All DBs
Position
complement(1817177..1819105)
Genome browser
AA seq
642 aa
AA seq
DB search
MNTENTKKYQSRLWIFYAILGLLLVILYSGLFFRQLIESESHAAKEKIQNQRRILTPGPR
GNLLDREGRVLVANKSKFSAVVFLSENQVQKSFSDSYRRMVRDYRERGEKIKSYSELRIL
SRANVLQSYLKGVNELIGRHEEVDATAITRHLNVNPLLPYPLIDNLAPEEFAILLESLPV
ESPVQVYVSNMRHYPYENAATHALGYVGYSPLEVQSDMPGSELRTFATKGTYGRNGIEKR
FDEQLQGKTGSEIWVVDPSGYQVESVQREYPRKGRDIELSIDIDLQLAGEAGYDLYGDKG
ALVAIDIDRMEVLAMLSRPDYNLNQTTPFISNKIFKEISDNQAWENKALRGLYPPGSPFK
LITAIAGLKAGKIDDNTVFECDGSHRVGGRNFPCMGHHGEIDLRTAIEKSCNEYFYRVGL
ETGVDNLSREAIYLRLNEPTHIDLPNETRGMLTPSREWKKTRFGEPWYPGDTANMSIGQG
ALIVTPLQMALMVASVAKNQVYSHPSILKQSPEQLARRPAPKPLGLPENLHKAIIDGMDR
VVSPTGTARAAIIKGVNIGGKTGTAQINKKDGNFELAWFVGFAPIEDPKIAVVALVEGQE
LNVSFGGGRYAAPMARYVLEAYFDKRPEYVNTQEATTTAALP
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaatacggaaaacacaaagaaataccagtcacgtctttggatattctacgctattctc
ggactacttctcgtcattctatacagtggcctattttttcgccagctaatcgagtccgaa
tcgcatgcggcaaaagagaaaatccaaaaccagcgtcggatactaacccctggtccaaga
ggcaatcttctggacagggaaggacgagttctagtagcaaacaagtccaagttctcggcc
gtcgtttttctttcagagaaccaagtacagaaatctttcagtgacagctatcggaggatg
gtacgagactaccgtgaacgaggagaaaaaattaagagttactcagagctcagaatactc
tcgcgagcgaacgttcttcaaagctacctcaagggggtcaacgaattgatcggccgacat
gaagaagtggatgcaaccgccatcacccgacacttaaatgtcaatccactacttccctac
cccctcatcgacaaccttgctcccgaagagttcgcgatccttctggaatcgcttcccgtc
gagtcacctgttcaagtgtacgtatccaacatgcgccactatccctacgagaacgcagcc
acgcacgcccttggatacgtaggatacagtccactagaggttcaaagcgatatgccagga
tcagaactgaggacgttcgcgacaaaaggcacctacggtcgcaatggaattgaaaagcgt
ttcgacgagcaactacagggtaaaaccggctctgaaatctgggtcgtcgaccctagcgga
taccaagtggaatccgtccaaagggagtatccgagaaaaggccgagatatcgaattgtcc
atcgatattgacctccaattagctggcgaagccggatacgatctatacggcgacaaagga
gccctagtcgccattgacatagatagaatggaagttttggcgatgctcagtcggcccgac
tacaatctgaaccaaaccacccctttcatctcaaacaagattttcaaggaaatcagcgac
aatcaagcctgggagaacaaggccttgcgcggcttgtaccctcctggttcgccttttaag
ctaataaccgccatcgcagggctaaaggcgggcaaaatagacgataatacagtctttgaa
tgcgacggttcccatcgagttggaggccgcaacttcccctgcatgggccaccatggagaa
atcgacttgcgcaccgctatcgagaaaagctgcaatgaatacttctatcgggttgggcta
gaaacgggcgttgacaatttgagtcgggaagccatctacctccgccttaacgaacccact
cacatcgatttgccaaacgaaactcggggaatgcttacgccttctcgagagtggaaaaag
actcgctttggagagccatggtatccaggtgacactgcaaatatgtcgattggacaaggt
gccctaatcgtaaccccactccaaatggccctgatggtagcttcggttgctaaaaatcag
gtctattcccatccgagcattcttaaacaatcacccgaacaactcgcccggcgccccgcc
ccaaaacctctgggccttcccgaaaacttgcataaggcgataatagatggcatggaccgc
gtagtcagccccaccggcaccgctcgcgccgctatcatcaaaggagtcaacattggaggt
aaaacaggcactgcccagataaacaaaaaggatggcaattttgagcttgcttggtttgtc
ggatttgcaccgatcgaggacccaaaaatagcggtggtcgccctggtagagggacaggaa
ctcaatgtgagctttggcggcggccgatacgccgctccgatggctcgctacgtcttggag
gcctactttgacaagcgtcccgagtacgtaaacactcaggaagctacaaccaccgccgcg
cttccttga
DBGET
integrated database retrieval system
