Candidatus Pelagisphaera phototrophica: GA004_08130
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Entry
GA004_08130 CDS
T09061
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GA004_08130 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppht03400
]
GA004_08130 (ruvA)
DNA repair and recombination proteins [BR:
ppht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GA004_08130 (ruvA)
RecFOR pathway proteins
GA004_08130 (ruvA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
HHH_3
Transposase_20
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QXD33646
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All DBs
Position
complement(1878834..1879451)
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AA seq
205 aa
AA seq
DB search
MIVLIEGKLLKATPLSAIISAGGIGYAVNIPVTTAEKLPQNGEIVILHTHAVYREDSQAL
YGFWEENDRDFFALVIEKVSGVGPKVAISLMSKLPLGNLISAISSEDANLLAKTPGIGKK
TAERIIIELKDKLTIFASASQSIDLTSGNQSVSAESEESSKLEDAALALQALGYKQIDAK
KAISKVVEKLGPNVSTEAMIKAALG
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgattgtccttattgaaggcaaactgctcaaagcaacacctctttcagcgattatctct
gcaggaggaattggatacgcagtcaatattcccgttaccacagctgagaagcttcctcaa
aatggggagatcgtaatcctccacacgcacgcagtttaccgcgaagactcgcaagcgctc
tacggattttgggaagaaaatgaccgcgacttttttgcgcttgtaatcgagaaagtttcc
ggtgtcggacccaaagtggcaatcagcctcatgagcaagcttcccctcggaaatctcatt
tctgcgatttccagcgaagacgcaaatctcctcgcaaaaacaccggggattggaaaaaag
accgcagagaggattatcatagagcttaaggacaagctcactatttttgcttcagctagc
caatcgatagacctaacctcaggaaaccagtctgtatccgccgaatcagaggaatcatct
aaactcgaagatgcggctctagccctccaagcacttggctacaagcaaatcgatgccaaa
aaagcgatttccaaagtagttgagaaactcggtcccaacgttagtaccgaagcgatgata
aaagccgcactgggctag
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