Candidatus Pelagisphaera phototrophica: GA004_08305
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Entry
GA004_08305 CDS
T09061
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppht03016
]
GA004_08305 (truA)
Enzymes [BR:
ppht01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GA004_08305 (truA)
Transfer RNA biogenesis [BR:
ppht03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GA004_08305 (truA)
Prokaryotic type
GA004_08305 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QXD33677
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All DBs
Position
1912878..1913609
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AA seq
243 aa
AA seq
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MRWKCGCSYDGTDYSGWQTQDGPLSIQQVVEECLSEIFKKETKAIGSGRTDAGVHAMEQV
FHFDFEWKHDPGSLVEAMRSLLPDTVTPLFVEKVEDDFHARFSAVSKWYQYRIYMGQATA
LENRYSWSLHGDLALEAMAKATSLLKGTHDFGAFAANRGIEYKTTVRKMFRSEMLQEKDF
LLLNFQANGFMYKMVRSLAGTVANVGLGRLSLDAFSELLKSTERTPMVFVAPAKGLFLKK
VFY
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagatggaagtgtggatgctcctatgacggaacggactactcaggttggcagacccag
gatgggcctttgtctatccagcaggtggtagaagagtgtctttccgaaatttttaagaaa
gagacaaaagcaatcggaagcggccgaacggatgctggcgtacatgcgatggagcaagtt
ttccattttgactttgaatggaaacatgatccgggctcactagtggaagcaatgcggtct
cttttgcctgatactgttacgccgttgtttgtggaaaaggttgaggacgatttccacgcg
cgattttctgcagtatccaaatggtaccaatatcgaatttatatgggacaggcgaccgca
ttggaaaatcgatacagttggtcgctgcatggagatctcgctctcgaggcgatggcgaag
gcaactagcctgttaaaggggactcacgatttcggagcgtttgcggcgaatcgaggtata
gaatacaaaactacggttcgaaaaatgtttcgatcagaaatgcttcaggagaaagatttc
cttttactcaattttcaggccaacggttttatgtataaaatggtgcggagccttgcaggt
acggtcgccaacgtagggcttgggcgtctgtcactggatgcgttttcggagttactgaaa
tccacagagagaactcctatggtttttgttgctccggcaaaaggcctttttctgaaaaag
gtcttttattag
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