Candidatus Pelagisphaera phototrophica: GA004_08910
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Entry
GA004_08910 CDS
T09061
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht02024
Quorum sensing
ppht03060
Protein export
ppht03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
GA004_08910 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GA004_08910 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GA004_08910 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppht02044
]
GA004_08910 (secD)
Secretion system [BR:
ppht02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
GA004_08910 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
MMPL
Sec_GG
Motif
Other DBs
NCBI-ProteinID:
QXD30505
LinkDB
All DBs
Position
2048476..2051007
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AA seq
843 aa
AA seq
DB search
MSGKHLWKLIATIVIVAISLSYLVPWEDQDFGEYLRTASESEEFHQILDRSQALTRTDDQ
MVSVYMALKKISNDERIDLSQYFPQISLEPSLRNIEKRNGILLSALLKVSKANLRKGLDL
AGGVAMTLQVDPAALEGIEKIERDEKLSKAIEIMQSRVNLYGVSEPIVRLVGDDRIEVQL
AGISIKDNPEILEEIKRPALLDFREVHLTDRPGIQPEPYGYQVMTLSRESGDQFVEEDLY
VSRYPVLTGKYVDSANPVQNSVGGYEISLNFSSEGAKRFGEITTKLAGQGRLAIVLDGKL
YSAPNVNEPILGGRASISGSFTQRQAIDLANVLNNPLEFKLEVAELYEVGPTLAKESISS
GKRAATWGVSLVAAFMIVYYMVGGVVALITVVLNLGIVLGALASVGATLTLPGIAGVILT
IGMAVDANILIFERIREELRTGKTLKSSLLGGFEKVFSTIFDANVTTFLVSIVMFVYGTG
PVKGFGLTLAIGVVTTMFCALVVNRLLLELLIETNLMKKFKMLSIVRNPKVPFLDFRKPA
FAISWCVVLIGVAGIYTKWDTIFGIDFTGGDEVSLAYESKIDESEINRIVVEQELGEVTP
QYVTPFGGGVEVLKLQTPFEESPKVLAALEAAFPQANFEAVGTNEIGPSIGKEIQKNAII
AIGISLGLILLYIAVRFEIGYGVGAIVATIHDILLTVGVFVMVPGHQFTAPMIAAILLIV
GYSLNDTIVVFDRIREELQLKPTAKLRDIVNSALNAVLSRSLLTSFTTLLAAVSLYVFGT
GVVSDIAFTFTIGIMTGTFSSIFIASPVFYWWHKGDRRSVEKSHDIAPEYEWQAGVKEVK
EGS
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaagcacctttggaaacttatcgcgaccatcgtcatcgtcgccatctccctc
tcttatctggtcccttgggaggaccaggactttggtgagtacttgcgcacggcttctgaa
agcgaagagtttcatcagattctcgaccgttctcaggcattgacccgaacggatgatcag
atggtcagcgtctacatggctctgaaaaagatcagtaacgatgagcgtattgatctgtcg
cagtactttcctcagatctcgctcgagccttccctccggaacatcgaaaagcgaaacgga
attttgctgagcgccttgttaaaggtttctaaggcaaaccttcgaaaaggactcgacctt
gccggtggtgtggcgatgacgcttcaagtcgacccggccgctttggagggcatcgaaaag
attgagagagacgagaaactttccaaggccatcgagatcatgcaaagccgtgtgaacttg
tacggcgtatccgaaccgattgtccgcctcgtcggcgacgaccggattgaggtccagttg
gccggaatcagcatcaaggacaatcctgaaatcctggaagagatcaaacggccagcttta
ctggacttccgcgaagtgcacctgaccgacaggcctggtattcagcccgaaccctatggc
taccaagtgatgaccttgtcgcgggaatccggcgaccagttcgttgaggaggatctttac
gtaagccgatatcccgtcctcacaggtaaatatgtcgatagcgccaatccagttcagaat
tcagtcggcggatacgagatctcgctgaatttcagtagcgaaggggcaaagcgatttggg
gaaataaccacaaagctagcgggccaaggccgcttggcgatcgttctagatggaaagctg
tactcagcgccaaatgtcaatgagcccattctcggggggcgggcatcgatttcaggaagt
ttcacgcaacgacaggccatcgatctggccaatgtgctcaacaatccgcttgagtttaaa
ctcgaagtggccgaactctacgaagtgggaccgaccctcgcaaaggagtcgatctcatct
ggaaagcgagccgcgacctggggtgtatctctggtcgctgcattcatgatcgtctactac
atggtgggtggggtggtggctctaattaccgtcgttctcaacttagggatcgttttggga
gcgcttgccagtgttggagcgaccctaacattgccgggaattgcaggggtgatcctgacc
attggtatggcggtcgatgccaacattctcatatttgaacgaattcgagaggaactgaga
acgggtaagacactaaagtcatcgctcttgggcggatttgaaaaggtgttttcgacgatc
tttgatgccaacgtaacgacgtttctcgtatccatcgtcatgttcgtctacggaaccgga
ccggttaagggatttggtctgactttggcgatcggtgtcgttacgaccatgttctgtgcc
ttggtcgtgaaccgcctattactggagcttctcattgagacaaatttgatgaagaagttt
aagatgctttccatcgttagaaatccgaaggtccccttcctggattttcgcaaaccagcg
tttgcgatttcgtggtgcgtcgtcctgattggcgttgccggaatttatacaaaatgggac
accattttcggtatcgactttaccgggggtgacgaagtttcgctcgcatacgaatccaag
atagacgaatcggagataaaccggatcgttgttgagcaggagcttggtgaagttactcct
cagtacgtaacaccgtttggcggaggtgtggaagtgctgaaactgcagacgcctttcgag
gaaagccccaaggtcttggccgcactggaggccgcctttccgcaagccaatttcgaagca
gtcggcacgaatgaaatcgggccgtccatcggcaaggaaattcagaagaatgccataatc
gcgatcgggatttccctaggtctcattctactgtatatcgcggttaggtttgaaatcggt
tatggggtaggggcgattgtggcgacgatacacgacatccttttgacggttggcgtattt
gtcatggttccaggtcaccagtttaccgctcccatgattgcggccattcttctgattgtg
ggttactcactcaatgataccatagtcgttttcgaccggatacgtgaagagctacagcta
aagccaaccgctaagttgcgcgacattgtgaactccgctttgaacgcggttctctcacgc
tctttgctaaccagtttcacgacattgctagcagcggtttccttgtacgtttttgggact
ggagtggtgagcgatatcgccttcacattcacgatcggcattatgacgggaaccttctcg
tcgatattcatcgctagccccgtgttttactggtggcacaaaggtgatcgccgcagcgtc
gagaagagccacgatattgcacccgaatacgagtggcaggctggggtcaaagaagtcaag
gagggcagctga
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