Candidatus Pelagisphaera phototrophica: GA004_09640
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Entry
GA004_09640 CDS
T09061
Symbol
dxs
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00730
Thiamine metabolism
ppht00900
Terpenoid backbone biosynthesis
ppht01100
Metabolic pathways
ppht01110
Biosynthesis of secondary metabolites
Module
ppht_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
GA004_09640 (dxs)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
GA004_09640 (dxs)
Enzymes [BR:
ppht01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
GA004_09640 (dxs)
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GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
TPP_enzyme_C
Transketolase_N
E1_dh
Motif
Other DBs
NCBI-ProteinID:
QXD30637
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Position
complement(2217841..2219778)
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AA seq
645 aa
AA seq
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MNTSQQSEANGNDPFPLLNAIEKPADIRSLSSDELTDLAAEIRAKLIDVTSINGGHLGPN
LGVVELTIAMHLVFNTPKDQFVFDTSHQGYVHKLLTGRNGKEFDKIRKNSGISGFLARSE
SPHDSFGAGHAGTALSAALGMAAARDQLGSDEHVVALCGDAAFTCGITMEALNNVASATK
RLIIILNDNEWSIAKNVGAISKYLNELITNPIYNRLHHDFGTFLQKVPGGEQLLKIGKNA
EKGWKSIMMPSSIFETYGVRYFGPIDGHDLPLLTRNLEFAREANEPVILHVVTKKGKGYR
PAIEKPESFHGTSPFEIDSGKSKSSQSVVPPNYQDVFGHSIVRFAKKDKSIVGITGAMPS
GTGLIHLSNELPDQFYDVGIAEEHAVLFAAGLATKGIKPVVAIYSTFLQRAFDQVIHDVC
LQNLPVVFCMDRAGLSPNDGPTHHGLFDVAYVRCVPNAVAMQPKDEDELVDMMHTAIQLK
RPVFVRYPRGAGTGVKIKSKPKALGVGQAQVLREGDDLVLWALGPMVRDALEISDRLKLE
DGLSAGVVNARFIKPLDNELLLSHAKDNRLIVTLEDGVLSGGFGSAVLETLSEREMSTPV
HRIGWPDEFVDHGSDIATLRATGGLSFDDMISGIRKKLETPSVAV
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
ttgaacacaagccaacagtccgaagcgaacgggaacgacccatttcccttgctcaacgcc
atcgagaagcctgccgacatccgatcattaagctcggatgagctaacggatcttgccgct
gaaatccgagctaagctgattgatgtcacttcgatcaatggcggtcacttgggaccgaac
ttgggggtggtcgagctgactatcgccatgcacctcgtctttaacacccccaaggatcaa
ttcgtgttcgacacctcacaccaaggatatgtccacaagctcctaacaggaagaaacggc
aaagaattcgacaagattcgcaagaacagtggcataagcggattcctcgctaggtctgaa
agtccacacgactcattcggagccggacatgccggaacagccctttctgccgcgctgggc
atggctgccgcccgtgaccagctgggctccgatgagcatgtcgtagcgttatgcggcgat
gccgccttcacttgcggcataacgatggaggccctcaacaatgtagcttcagcgaccaaa
cgtcttatcatcattctcaacgacaacgaatggtcgattgccaaaaacgttggagctata
tcgaaatacctcaacgaactgatcactaatccaatctacaaccgccttcatcacgatttc
ggcacttttttacaaaaggtgcccggtggagagcagttgctcaagatagggaaaaatgca
gagaaaggctggaagagcatcatgatgccctcttccatttttgagacttacggtgtccgc
tacttcggacccatcgacgggcatgaccttcccctgctgactcgcaatcttgaatttgcc
agagaggcaaatgagcccgtgattcttcatgtagtcaccaaaaagggaaaaggctatcgc
cctgcgatcgaaaaacccgagagcttccacgggacaagcccctttgagattgattcaggc
aaatcaaagtcatctcaatcagtcgtccctccaaactaccaggacgtctttggccattcg
atcgtgcgcttcgccaaaaaggacaaatccattgtcgggatcaccggtgccatgccttcc
ggtaccggtttgatccatctttccaatgagcttcccgaccagttttacgatgtagggatt
gcggaggagcacgcggtactttttgcagcggggctcgctacgaagggcatcaagccggtg
gtcgcgatctactcgacgttcctccagcgcgcgttcgaccaggtcattcacgatgtttgc
ctgcaaaatctaccggtagtcttttgcatggaccgtgcgggactttcccccaacgacggc
ccaacccaccacggtcttttcgatgtagcgtatgtgcgctgtgttcccaatgccgtcgct
atgcagccaaaagacgaggatgagctggtagatatgatgcacacggccatccagctgaag
cgacctgtttttgttcggtatcctcgcggcgctggaaccggagtgaaaattaagtctaaa
ccaaaggctttgggtgtgggacaagcacaagtcttgcgggaaggagacgatctggttctc
tgggcccttggtcccatggttcgggacgctttggaaatcagtgatcgtctcaagctggag
gacggactctccgcaggagttgtaaacgctcggttcatcaagccgctagataatgagctg
ctcctttcccacgcaaaagataatcgtcttatcgttaccctcgaagacggagtcttgtcg
ggcggttttggcagcgccgttctggaaacattatccgagcgcgaaatgtcaactcctgtt
catagaatcggatggccggacgagttcgtagaccacgggtccgatattgcgaccttgaga
gcaaccgggggactctcatttgacgatatgatatccggcattcgcaaaaaactcgagacg
ccgtctgttgccgtctag
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