Candidatus Pelagisphaera phototrophica: GA004_09645
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Entry
GA004_09645 CDS
T09061
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GA004_09645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppht03400
]
GA004_09645
Enzymes [BR:
ppht01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GA004_09645
DNA repair and recombination proteins [BR:
ppht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GA004_09645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
NBAS_11th
DUF3221
HR1
Mst1_SARAH
Motif
Other DBs
NCBI-ProteinID:
QXD30638
LinkDB
All DBs
Position
complement(2219851..2220096)
Genome browser
AA seq
81 aa
AA seq
DB search
MTKKTKDKELSFEEGLEKLEAIVEEMESGELNLDNLVKRYEAGSKLLVHCDKKISEAEAK
IEILRNQDAENPEFENFDPDE
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaaaaagactaaagacaaggagctctcatttgaagagggactggaaaagctcgag
gcaatcgttgaagaaatggaaagcggcgaattgaacttggacaacctcgttaagcggtat
gaagcgggttcgaagctgctcgtccattgcgacaaaaagataagcgaggctgaggcgaaa
atcgagatcctgcgcaaccaagacgccgagaatccggaattcgaaaatttcgatccagac
gagtag
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