Candidatus Pelagisphaera phototrophica: GA004_10110
Help
Entry
GA004_10110 CDS
T09061
Name
(GenBank) DUF3516 domain-containing protein
Organism
ppht
Candidatus Pelagisphaera phototrophica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3516
DEAD
DEXQc_Suv3
ResIII
Helicase_C
IstB_IS21
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
QXD30721
LinkDB
All DBs
Position
complement(2343920..2346478)
Genome browser
AA seq
852 aa
AA seq
DB search
MDFPLQPQNGKLDSDELLERFLDYLSKKSIEPYPAQEEAILEVFSGKNVILNTPTGSGKS
LVAAAMHFFSASRGRRSVYTCPIKALVNEKFLALCRDFGPENVGMMTGDASVNQGAPILC
CTAEILANIALRDGEKARVDDVIMDEFHYYSDHERGVAWQAPLLTLPHCRFMLISATLGD
TQFFSRDLERLTGIECATVSSNERPVPLEFSYLEVPLVEALEKLKEENKRPVYIVHFTQK
SASDTAQNLMSVNACTKEEKQELRVALQGAAFTSPFGKEIKKYLANGIGLHHAGLLPKYR
VLVESFAQRGLLQFICGTDTLGVGVNVPIRTVLFTQLCKYGGRKTSILSARDFHQISGRA
GRKGFDDRGYVVALAPEHVIENKRQEAKSADDPKKKRKLVKRRPPERGFVHWDEHTFERL
QSASAEPLESRFTVSHGMLLNILSRKGDGCKAMRTIIADCHNTEYSKKSLRRRGFQLFRA
LVERNIIEINDPSQSVQKLQLNVELQDDFSLNQTLSLYCIDALGLLNTQDPQYPFKLLSV
LESILEDPDVILRRQLDVLKSDKIAEMKAAGIEYEQRIEKLDLMEYPKPESEFIYATFNE
FVRLHPWVGQENIKPKSIAREMFERYSSFSDYVKLYGLARSEGLLLRHLTNVYRILENTV
PTVFKTENVNEITVYLEYLLKNVDSSLLDEWERIRNPEYVKETSEELPIRAESIDITREK
DSFTRLIRNEVFSFIRLLANRQYLEIAKRFDLKSALSELGSGAKWEDIELEKLMNPFYES
RGWIRLDPAARSLEHTHISKGEDHTVWTVDQTLVDSEELNDWLVEFSVDLAESKASGKVS
LAIIRIGLFRAH
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggactttcccctgcagccgcagaatggcaaactggattcggacgagcttctcgagcgc
ttcctcgactacctgtcgaaaaaaagcatcgagccctatcccgcacaagaagaggcgata
ctggaagtcttcagtggaaagaacgtcatcttgaatacgccgacaggctctgggaagtct
ctggtagcggcagcgatgcatttcttttcagcgtcgaggggcaggcggtccgtttatacc
tgccccatcaaggccctcgtgaacgagaaattcctggctttatgtcgggactttggaccg
gaaaacgttggtatgatgaccggcgatgcaagcgtcaaccaaggagctccaatcctctgc
tgtaccgctgaaattcttgcgaacatcgcgctgagagacggagaaaaggcccgagtggat
gacgttatcatggacgaatttcactattactcggaccacgagagaggggttgcctggcaa
gctcccttgctaaccctgcctcattgtcgattcatgctgatctcggcaacattgggagat
acgcaattctttagtcgcgatctggaaagactaaccggcatcgaatgtgcaactgtatcc
agtaatgagagacctgttccgctggagtttagttacctggaggtgccattagtcgaggca
ttggaaaaactgaaagaggaaaataagcgacccgtctatatcgttcatttcacgcagaag
tcggcctcggacactgctcagaacttgatgagcgtgaacgcgtgcacgaaagaggaaaag
caggaattgcgtgtggccctccagggtgctgccttcacgagtccgtttggcaaggaaatc
aaaaagtacctcgccaatggtattggcctgcaccatgcgggtctactgccgaagtaccgt
gtattggttgaatcgttcgctcagaggggtttactacaatttatttgtggaacggataca
ttgggggtgggagtaaacgttcccataagaacggtacttttcacgcagctttgcaagtat
ggcggaaggaaaacgtctattcttagtgcacgcgattttcatcagatcagtggacgagcg
gggcggaaaggatttgatgatcgtggctatgtggtggcattggctcctgagcatgtaatc
gaaaacaagcgtcaagaggcgaagtccgccgacgatccgaaaaagaagcgaaagctggtt
aagcgaagaccgccggaaaggggatttgtccattgggacgagcataccttcgagcggctt
caatctgcttctgcggaacctttagaatcccgatttaccgtctctcatggaatgctttta
aacattcttagtcgtaagggtgacggctgcaaggcgatgcgaacgatcatagcggattgc
cacaatacggagtattccaaaaagagtctccgaagaaggggttttcagctctttcgggct
ttggtggagcgaaatattatcgagatcaacgatcctagccaatcagtccagaagctccaa
ttaaatgtggagcttcaggacgacttttcactcaatcagacactttcactctactgtatt
gacgccttgggattattgaatacacaagacccgcagtacccgttcaaactgctgagtgtt
ctcgaatcgatactggaagatccagacgttattttgaggcggcagcttgatgttttgaaa
tccgataaaatagctgaaatgaaagcggcaggaatcgagtacgaacagcgtattgagaag
ctggatttaatggagtatccgaaaccggaaagtgagttcatttatgctaccttcaacgag
ttcgtgcgactgcatccttgggtgggccaggagaatattaaaccgaaatccatcgcccga
gaaatgttcgagcgctactcaagtttcagcgactatgtgaagctctacggactcgcccgc
tctgaagggctcctcctacggcatttgaccaacgtctaccgtattctggagaatactgtg
ccaactgtcttcaagactgaaaacgttaatgaaatcacagtctatctagagtatttacta
aaaaatgtggattcaagtttgctcgacgaatgggagcgcattcgaaatcccgaatacgta
aaagagaccagtgaggagcttccaattcgagcagaatcaatcgatatcacgagggagaaa
gattcctttaccagattgatccggaacgaggttttttcgtttatccgtctactggcgaac
cggcagtatttagagatagcgaaacgcttcgatctaaagtcagctctttccgaattgggc
agcggtgccaagtgggaagatatagaactggagaaactaatgaatccattctatgaaagt
agaggatggatacgcttggatccagccgcacgatcgctcgagcacactcacatttcaaaa
ggcgaagaccatacggtctggactgtcgatcaaactctcgtggattcagaggaactgaat
gactggctggtcgagttttccgtggacctcgctgagtcaaaggcatctggtaaggtcagt
ctagcgattatccggattgggctgtttcgggctcattga
DBGET
integrated database retrieval system
