Candidatus Pelagisphaera phototrophica: GA004_10245
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Entry
GA004_10245 CDS
T09061
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
ppht
Candidatus Pelagisphaera phototrophica
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA
AAA_16
HTH_30
Xre-like-HTH
TIP49
HTH_29
HTH_23
HTH_28
DUF134
cREC_REC
AAA_2
HTH_7
Motif
Other DBs
NCBI-ProteinID:
QXD30743
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Position
complement(2369122..2370486)
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AA seq
454 aa
AA seq
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MLPTVLIVDDERHTREGLQQVLEDQYDIYLAENADQAFTLMESETFDLILTDLRMPGKSG
LKVIDKALELKNRPPVIMVTAYGNVPSAVEAMKRGAYDFLTKPVNLEKLEILAKRALESK
TLQVEVEQLHERLDVKYSFDGIIGNSAELKNVIERVKLVAPSKASVLIEGETGTGKERIA
QAIHQNSNRPQGPFVAVHCAALPANLLESELFGHERGAFTGAAERRIGRFELAHEGSLFL
DEIGEISLSTQVKLLRFLEQRTFERIGSSKSITVDMRLIAATNRDLQEMVREGAFREDLF
FRLNVVQITMPPLRDRSEDLPVLLNHFLLEFAEENEIEAPTFETGAMQCLRRYSWPGNIR
ELRNFAENAVVIHRGSVIHDYDLEAKFRGESLRIDGERVIVSPLDKEENEKRLLREALAD
SKGNRTKAAKLMGISRRTLHRKLQQWPELDVVDR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgctaccaactgtcttgattgtcgatgatgaacggcacacccgcgaggggctccagcaa
gttctggaggatcagtacgacatctatttggcagagaatgcggatcaggcgttcacactc
atggagagtgagacgttcgatttgattctgacggatttgcgaatgcccggaaagtcgggt
ctcaaggtcattgacaaagcgttggagctaaaaaacagaccaccggttatcatggtgacg
gcgtatggaaatgtgccctcagcggttgaggcgatgaagcgtggggcctatgatttcctc
acgaaaccggtcaatttggaaaaattggaaatactagcgaaacgcgctcttgagtcgaaa
acgctccaggtggaggtcgagcaactgcacgagcggctggatgtgaagtacagttttgat
ggtattataggaaattcggctgagctaaagaatgtcattgagcgggtgaagctagtggcg
ccttcgaaagcgagtgtcttgatcgagggtgaaacgggtacgggtaaggagcgaatcgcg
caagcgatccaccaaaacagcaatcgaccgcaaggtccctttgttgcggtccattgcgcg
gcactgcctgctaacctactggaaagcgaactctttgggcacgagaggggtgcctttaca
ggagcggcggagcgtcggatcggccggtttgaactggcccacgaaggaagcctgtttttg
gacgagatcggcgaaatcagtttgtcgactcaggtcaaactgctccgttttttagagcag
cgtacgtttgagcgcattggtagttctaaatccattacagtagacatgcgcttgattgcg
gccaccaacagggacttacaggagatggtgcgggaaggtgcattcagagaagacttgttc
ttccgattgaatgtggtgcagatcacgatgcctccactaagggatcgcagtgaggatcta
ccagtacttttgaatcactttttgctggagttcgccgaagagaacgaaattgaggcaccg
acttttgagacaggcgcgatgcaatgcttacggcgatactcgtggccgggaaatattcgc
gaacttcggaatttcgcagagaacgcggtggtgattcaccgggggagcgtaattcacgat
tatgatttagaagcaaaattccggggagagtcgcttaggatcgatggggagcgggtaatc
gtttcacctttggataaggaagagaatgaaaagcgtttgctgcgtgaggccctggcggat
tccaaggggaatcgaacgaaggcagcaaagcttatgggtatcagtcgccgcacacttcac
cgcaagctgcagcaatggcctgaactggatgtggtggatcggtga
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