Candidatus Pelagisphaera phototrophica: GA004_10450
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Entry
GA004_10450 CDS
T09061
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
GA004_10450 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ppht03011
]
GA004_10450 (rpsA)
Ribosome [BR:
ppht03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
GA004_10450 (rpsA)
Bacteria
GA004_10450 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
OB_RRP5_4th
DUF2110
Tn7_TnsC_Int
Motif
Other DBs
NCBI-ProteinID:
QXD30780
LinkDB
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Position
complement(2415482..2417140)
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AA seq
552 aa
AA seq
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MSSIMEELLAQTTFDKLKEGSIIKGAITEIRQVEVVVDIGGKSEGLISASEFSDLGDLQI
GEEIEIFLEKLEDRDGNPILSFDKAEQKKNWENIITKCEEGSIVQGRVKGKVKGGLIVGM
GVDAFLPASHIDIQPPKNLDQYLGQTYDYKVLKINLERKNIVLSRRELIEEQRSSKRREL
LDKINPGDVVKGIVKNITDFGAFIDLDGMDGLLHITDMSWGRISHPSEMLKQGEEIDVMI
IEINREKERVSLGLKQTKSNPWDSIENRYPIGAHVAGKVVNLVPYGAFIEIEEGVEGLVH
VTEMSWTKRITKPSDLLKVGDDVEAVVLGIQKDEEKISLGIRQLDPNPWDMVVHNYPVGA
HVHGKVRNITTYGAFIELEEGIDGMVHVSDMSWTRKINHPSEVLKKSDEIDAIVLDVDTS
NQRISLGVKQLTDDPWADIDGRFRIGDVVTGTISKITSFGAFVELQDHIDGLVHISQISE
ERIEKIKDSLNIGDGVTARVIKIDREERRIGLSIKAANYDEEQLAAETQTYDNMKDGGDL
MNLGDILDQATK
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgagttctataatggaagaacttctcgcccagaccacctttgacaagctcaaggaagga
tctattatcaagggtgcgatcactgaaatccgccaagtcgaagtcgttgtcgatatcggc
ggtaaatctgaaggcctcatttctgcatcggaattctccgatctcggtgacctccaaatt
ggcgaggaaattgagatttttctggaaaagcttgaggatcgggatggaaatcccattctg
tcatttgacaaggctgagcaaaagaagaattgggagaatatcattactaaatgcgaagag
ggctcaattgtccaaggtcgcgttaagggaaaagttaagggcggcttgatcgtcggcatg
ggagtggacgcattcttgccggcatcgcatatcgatatacagcctcctaagaatttggac
cagtaccttggccaaacttacgactacaaagttcttaaaatcaacctagagagaaagaac
atcgttctctcacgccgtgaactaattgaagagcagcgatcttccaagcgccgcgaactt
ctcgataagatcaacccgggcgacgtagttaagggtatcgttaagaacatcactgatttt
ggagctttcatcgacctcgatggaatggacggattgcttcacattactgatatgagctgg
ggccggatctcgcatccgagcgaaatgctcaaacagggagaggaaatcgacgtgatgatt
atcgaaatcaatcgcgaaaaagagcgggtttcactcggtcttaaacagactaagtccaat
ccatgggacagcattgaaaaccgctatcccattggggctcacgttgctggcaaggtcgtc
aatttggtaccttatggtgcgttcatcgaaatcgaagaaggggttgaaggactggttcac
gtaacagaaatgtcgtggacaaaacgcattaccaagccgagcgatctcctaaaggtggga
gacgatgttgaagcagtggttcttggaattcagaaggacgaagagaaaatctcgcttggc
attcgccagttggatccgaatccatgggatatggtggttcacaattatccagtgggcgcc
catgttcatggcaaggttcggaatattactacctacggcgcgttcatcgagctggaggag
ggaattgacggaatggttcacgtttcggacatgtcttggacgcggaagatcaaccatcca
agtgaagtcctaaagaagagcgacgaaatcgatgcaatcgtattggatgtcgatacttcg
aaccagcgtatttctctcggcgttaagcagcttacagatgatccatgggcagacattgat
ggtcgcttccgtataggtgacgtggttacaggaacgatctcgaaaattacttcgtttggg
gcgtttgttgagcttcaggaccatattgatggactagttcacattagccagatcagcgaa
gaacggatcgagaagatcaaggactcgctaaatatcggtgacggggtcacggcccgcgta
atcaagatcgatcgcgaagaacgtcgtatcggattaagcatcaaggcggctaattacgat
gaagagcagcttgccgcagaaacccagacttacgataatatgaaggatggcggcgacttg
atgaacctcggagatattctcgatcaggcgaccaagtag
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