Candidatus Pelagisphaera phototrophica: GA004_10550
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Entry
GA004_10550 CDS
T09061
Symbol
rlmN
Name
(GenBank) 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppht03009
]
GA004_10550 (rlmN)
Enzymes [BR:
ppht01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
GA004_10550 (rlmN)
Ribosome biogenesis [BR:
ppht03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GA004_10550 (rlmN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
QXD30799
LinkDB
All DBs
Position
2437140..2438240
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AA seq
366 aa
AA seq
DB search
MKYVPEKQPIYGQSLDSLQNRFAEIGEPRFRAKQVLDWLYKKRARSWEEMSNLPQPLRNR
LKQEFEIAPTKRILAKESSDETEKLLLEMGDRSLVETVVIRAPQIGVGQKNSRKTICIST
QVGCAYGCRFCASGLAGWKRDLSVGEIVSQLIHVCHLEDETTQRAREEIASFDNIVVMGM
GEPMANYENLLPALRILNAPWGLNFGARRITISTSGIVPKILKLTNEPEQFRLAVSLHGA
TNDVREQIMPINKRYPLEELIPAIERYASTKGRMVTLEFILIEKINDTFEQAEALSKIAL
KLNAHVNLIPYNTVPGLDWKRPSLTRQDSFYERLKRKGVSTTIRREKGHDIAAACGQLKL
KSKQSS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacgttcctgaaaaacagcccatctacggccaaagccttgattcccttcagaat
cgctttgctgaaatcggtgaaccgcgattccgggcaaaacaagtgctggactggctttac
aaaaagcgagctcgatcctgggaggaaatgagcaacctgccccagcccctgcgaaaccgt
ctgaaacaggaattcgaaattgctcccaccaagcgaatcttagccaaagagtcctcggac
gagaccgaaaaactcctcttggaaatgggcgaccgctccctcgtggaaaccgttgtcatc
cgagccccacagattggtgtcggccagaagaactcacgcaaaaccatctgtatttcgact
caagtcggctgtgcctacggctgccgcttctgcgcctcgggactggccggatggaagcgc
gacctcagcgtcggtgagattgtatcccagctcatccacgtctgccacctcgaggacgaa
acgacccaaagagcccgcgaggaaatcgcctcgttcgacaatattgtagtgatgggaatg
ggagagcccatggccaattacgagaacctcctgcctgcccttcgcatactcaatgcccct
tggggtctaaatttcggggcgcgacgcatcacgatctccacctctggcatcgttcccaag
atcctcaagcttaccaacgaaccagagcaatttcggctcgccgttagccttcacggagca
accaacgacgtccgggaacaaatcatgccgatcaacaagcgctatccactcgaggaactc
attcccgctatcgaacgatatgcttcaacgaaaggacgtatggtcactctggagttcatt
ctaatagaaaaaatcaacgacaccttcgaacaggcggaggcactcagcaaaatcgccctg
aaactaaacgcccacgtaaacctcataccctacaacaccgtccccggtcttgactggaaa
agacctagcctaactcgccaagatagcttctacgaacgactcaagcgcaaaggcgtcagc
accaccatccgaagggagaaaggtcatgatatcgcggcagcctgcggacaactgaagctc
aagtccaagcagtcgtcctaa
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