Candidatus Pelagisphaera phototrophica: GA004_12605
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Entry
GA004_12605 CDS
T09061
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00470
D-Amino acid metabolism
ppht01100
Metabolic pathways
ppht01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GA004_12605 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GA004_12605 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppht01011
]
GA004_12605 (alr)
Enzymes [BR:
ppht01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
GA004_12605 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppht01011
]
Precursor biosynthesis
Racemase
GA004_12605 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
QXD31173
LinkDB
All DBs
Position
2894252..2895406
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AA seq
384 aa
AA seq
DB search
MSQSTTTPFRCWAEIDLAALERNLKSIRAALPEHIKYIAVVKAEAYGHGMQQTVARLMQA
NVDMFAVANVLEAAKIREIGTGWPIIVLGATLENEESYLFEYDLIPTISTIEEVERLNRK
ARSHEKPLKAHIKIDTGMGRLGIWHEYATELFDAFHKATFLTLGGVYTHFASASRDPEFT
RRQRQLFTETIAKVDWLETEKLLIHADNSAGISTFAPDSVYNAVRIGLLQFGIAPYPLSI
LGEVDTTPIFEFKSRVGIVKQLPAGATISYGRSRTLQRDSRVAIVCAGYGDGVPLKLSDR
GDVLISGERCPILGQVTMDQTIVDVTDIEGVVKSGDQVTLIGPQGEGGIRLQEFSEWAET
IPWEILCSVTKRVPRIYRTAIITG
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtgagccaatccaccacaaccccattccgctgctgggcggagatcgacttggccgctctc
gagcgaaatctaaaatcgatccgggccgcccttcccgaacacatcaaatacattgcggtt
gtgaaagccgaagcctatggccatggaatgcagcaaacggtcgctcggcttatgcaagcg
aatgtagacatgttcgcagtggctaacgtgctcgaagccgcaaagattcgcgaaattgga
acgggctggccgattattgtcctaggcgcaacactggagaatgaagagtcctacttgttt
gaatacgacttgattcctaccatttcaacgattgaagaggtcgaacgtctcaaccggaaa
gcccgttcccacgaaaagccactcaaagctcacatcaaaatagacaccggcatgggccga
cttggaatttggcacgaatacgccactgagcttttcgacgccttccacaaggctacattc
ctcactttaggcggcgtttacacccatttcgcgtccgcaagtcgagatcctgaattcact
cgacggcaacgtcagctcttcaccgagacgatcgctaaggtcgactggctcgaaaccgaa
aagcttctgattcacgctgacaacagtgctggtatttcaacgtttgcgcccgacagtgtc
tacaacgcggttcgaataggattactccagtttggcatcgccccctacccgctctccata
ctgggagaagtggatacaactcccattttcgaattcaagtctcgcgtcggcatcgttaag
cagctacccgcaggcgcaaccatcagctatggaagaagccgcaccctgcaacgggatagc
cgcgtcgccatcgtgtgcgcgggctacggagatggtgtccctctcaagctaagcgaccgt
ggagacgtactcatcagcggcgagcgctgcccgattcttggccaagtaacgatggaccag
accatcgtagatgtaaccgacattgaaggagtggtaaaaagtggagaccaggtcactctc
atcggaccgcagggggaaggtgggatccgtttgcaggaattcagcgagtgggcggagacg
atcccttgggaaattctttgctccgtcacaaagagagtccctcgcatttaccgaacggcg
attattacgggctga
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