Candidatus Pelagisphaera phototrophica: GA004_14725
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Entry
GA004_14725 CDS
T09061
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GA004_14725 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppht03400
]
GA004_14725 (mutS)
DNA repair and recombination proteins [BR:
ppht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
GA004_14725 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
AAA_29
AAA_14
Snapin_Pallidin
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QXD31562
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Position
3393910..3396465
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AA seq
851 aa
AA seq
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MAKGKITPMMQQYFEVKRNLPSNTLLLFRLGDFYEMFHEDAEIGSQLLGITLTKRSDYFM
AGIPYHAAEQYIGKALQAGKKVAICDQVETPQPGKLVKRSLTRILTPGTTIEDNQIESSR
NHYLAAFELEKSGASLCWLDLSTAEFQIATGKSVDDLMPVLTSIDPAEMLVMEGEENRWR
AMAHDGSTHDELTHFLATRSVTELPGYHFNIDAGVQSVMDTLGVINLEGFGIDKDHPALG
CAGAVLHYVTENLRAKPANLSSIREYSYAASLLLDPATLRNLEIFKSTRGTREGSLLQSI
NKTTTASGSRQLEQWLISPDRRLDELRRRQDSVEQFVKSPLAVKEIQDLLKSVRDIKRIL
GRLQNRLRNPRELGGIRDTLNQLPGILDTLAPFTGTPIDSISSQLNTLPHLAELLNKGLK
EELPNNLSGGGYIAKGYDDTLDGMLSLTTDNKLWLSNLEAEERERTGIKNLRIKFNNAFG
YFIEISKSNLTLVPDDYIRKQTMVNGERYVTESLKQKEKEIFHAEENSKRREEELFAGLV
AAVLEESGPLIQTASALAELDVFCGWAEIARLWNYCKPELDESDTIEILQGRHPVVEQML
KQNASGLASSQAFVPNDSQLSASESQIHLITGPNMAGKSTFIRQVALITLLAQVGCWTPA
TSAKIGLVDRIFSRVGASDDLARGNSTFMVEMNETANILNNATRHSLIILDEIGRGTSTY
DGLSIAWSVVEHLHRELDAGPKTLFATHYQELTQLETHLGRLENFSVAVKEWNDDIVFVR
QVVKGAADRSYGIQVARLAGLPQPVIDRAKEILQKLESEDAIVAVISPMPRAKPHKKIRV
EQNDDQLNLFS
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaggcaagataactcccatgatgcagcagtatttcgaggttaagcgtaacctg
ccctcgaacacgctgctcctgtttcgtctcggtgacttctacgaaatgtttcacgaggac
gcagaaatcgggtcccaactgctgggaatcactctgaccaaacggagcgactacttcatg
gcgggtattccctaccacgccgcggagcagtatatcggaaaagctctccaggccggaaag
aaagtggccatatgcgatcaggtggaaactccccaaccgggaaaactcgtcaaacgctcg
ctgactcgaatcctcacacctggcaccacaatcgaagacaaccagatcgaatcgagtcga
aaccactacctggccgcattcgagctggaaaagtcgggcgcgtccctctgctggctcgac
ctgtccacagccgaattccaaatcgccaccggtaaatcggtcgatgacctcatgcccgtg
ctaacgtcgatcgatccggctgaaatgcttgtcatggaaggcgaggaaaatcgctggaga
gccatggcccatgatggctctactcacgatgaactcactcacttcctagcgacccgatcc
gtcaccgagcttcctggataccacttcaatatcgacgccggagtccaatccgtaatggac
acacttggagttatcaatctagagggctttggaatcgacaaggaccatcctgcgttggga
tgtgccggtgcagtgcttcattatgtgacagagaatctgcgggcaaagccagccaacctg
tcttccattcgcgaatacagttatgcagcctccctgcttctagatcccgccaccctgcga
aatctcgaaatcttcaaatcaacccgtggaacccgcgagggtagcctccttcagtccatc
aataaaacgaccactgcatccggttcccgtcagctcgagcaatggctcatttcccctgac
cgacgactagacgagctacgacgccggcaggacagtgtggagcagttcgtgaaatccccg
ctggccgtaaaggaaatccaggaccttttgaagtccgttcgcgacatcaagcgcatcttg
ggtcgcctgcagaaccggcttcgcaatccgcgtgagctcggcggcattcgggacaccctc
aaccagttaccaggaatcctcgatacactagctccgtttacgggaactccaatcgactct
atatcctcccaactcaacacccttccccacttggctgagcttctcaacaagggactcaaa
gaggaactgcccaacaatctctccggtggggggtacattgccaaaggctacgacgatacc
ctcgatggcatgctttcactgaccacggacaacaaactatggttgtcaaaccttgaggcc
gaggaaagagaacgcacgggaatcaagaacttgagaatcaagttcaacaacgcgttcggc
tatttcatcgaaatctccaagtcaaatctcaccctcgtacccgacgactacatacgcaaa
caaacaatggtcaacggtgagcggtacgtcaccgagagtttaaagcagaaggagaaggaa
atattccacgcagaagaaaacagtaaacgaagagaggaagagcttttcgccggtttagtc
gctgccgtactcgaagaatctgggccgctaatccaaacagcctccgcgttggccgaactc
gacgtgttttgcggatgggctgagatcgctcgcctgtggaactactgcaagcccgagctc
gacgagtccgatacgattgaaatcttgcaaggccgccaccccgtcgtggagcaaatgctt
aaacaaaatgcatcgggactcgcaagcagccaggcattcgttcccaatgattcacaactc
agcgcatccgaaagtcagatacatttgatcacagggccgaacatggcggggaaaagcacc
tttattcggcaagtggctctcattactctcctcgcccaagtcggatgctggactcccgct
acttccgcaaagatcggactggtcgacagaattttctcgcgcgtcggggcgagcgacgat
ctcgcccgcggaaactctaccttcatggtagagatgaacgagacggctaacattctcaat
aacgctacgcgacacagcctcatcatactggacgaaattggccgcggcacgagcacctat
gatggcctcagtatcgcttggtctgtggtggagcatctgcatcgcgaattggatgcagga
cccaaaacgctctttgcgacccattaccaagagctaacccaactggagacccatctgggt
agactcgagaatttctcggtcgctgtgaaagagtggaatgacgacatcgtgttcgttcgg
caggtcgtaaaaggagctgctgacagaagctacggcatccaagtagcccgactcgcaggg
cttccccaaccggtaatcgatcgggctaaggaaatcctgcaaaagcttgaatccgaagat
gcgatagtagccgtgatttcacctatgccaagagcaaagccgcacaaaaaaatacgcgtc
gagcaaaacgacgaccagttgaacctgttcagctag
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