Candidatus Pelagisphaera phototrophica: GA004_14820
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Entry
GA004_14820 CDS
T09061
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GA004_14820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppht03400
]
GA004_14820
Enzymes [BR:
ppht01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
GA004_14820
DNA repair and recombination proteins [BR:
ppht03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GA004_14820
Prokaryotic type
GA004_14820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
TPR_Sec16
UPF0172
Motif
Other DBs
NCBI-ProteinID:
QXD31581
LinkDB
All DBs
Position
3412828..3413868
Genome browser
AA seq
346 aa
AA seq
DB search
MNDSSLVAKAADFRAQLIDWYDQSARDLPWRSRPSLYKTVVSEFMLQQTQVKTVLPYFHN
WLQVFPGFEALASTSEEAVVKQWEGLGYYSRARNLHKLARIVSDLDSIPTDAKSWLALPG
IGPYAAAAVCSIAFSDPSAVVDGNVVRILSRLIGDRSEYRTTTDAAKTYQSLATALLNHA
RPGDHNQAMMELGATLCQNQKPQCLLCPVRSLCQARAQGIETKIPRFNKTKAVKQTVERA
WIVSPKGVLVYRIPQTASRMKGLHEIPSLEVLNLKTPKTSPLIVRQRSITKYRITERFHE
ISAEKAFNGDLPDHLLWATPDSIASLTFTGPHRKWITELIDIVSEK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaacgactcctccctcgtagccaaagccgcagactttcgggctcaactaatcgattgg
tacgatcaaagcgctcgcgacctgccctggcgctcgcgtccgagcctctacaaaacggtg
gtttccgagttcatgctccagcaaactcaggtgaaaacggttttgccctacttccacaac
tggctccaagtcttccccggtttcgaagcgctcgcatccaccagcgaagaggccgttgtt
aagcagtgggagggtctcggctactactcgcgagcccgaaaccttcacaaactggccagg
atcgtttcggatctcgattcgattccgaccgacgccaaaagctggctcgccctccccggc
atcggcccctacgccgctgccgcagtttgcagcatcgccttttccgatcctagtgccgtg
gtcgatggcaacgtggtccggattctatcgcgtttgattggggatcgctccgaatacagg
accaccaccgacgctgccaaaacctaccagtcgctggccaccgcccttctcaatcacgct
cggccgggcgaccataatcaagccatgatggaactcggggctacactctgccaaaatcaa
aagccacagtgccttctctgccccgtacggtcactctgccaagccagagcccagggcatc
gaaaccaaaattcctcgcttcaacaaaacaaaggccgttaaacaaaccgttgagcgtgct
tggatcgtaagtcccaaaggagttctcgtataccgaattccacaaaccgcgagccgcatg
aagggcctgcacgagataccctcgctcgaagtgctcaatctaaaaaccccgaaaacgagc
ccactaatcgtacgccaacgctccatcaccaaataccgaataaccgagcgtttccacgaa
atttccgcggaaaaggccttcaatggcgacctgcccgatcacttgctttgggccactccc
gattcaatcgcttcacttaccttcaccggcccccatcgcaagtggatcaccgagctaata
gatattgtttcagaaaagtag
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