Candidatus Pelagisphaera phototrophica: GA004_14985
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Entry
GA004_14985 CDS
T09061
Name
(GenBank) tyrosine--tRNA ligase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GA004_14985
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppht01007
]
GA004_14985
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppht03016
]
GA004_14985
03029 Mitochondrial biogenesis [BR:
ppht03029
]
GA004_14985
Enzymes [BR:
ppht01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
GA004_14985
Amino acid related enzymes [BR:
ppht01007
]
Aminoacyl-tRNA synthetase
Class I (A)
GA004_14985
Transfer RNA biogenesis [BR:
ppht03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
GA004_14985
Prokaryotic type
GA004_14985
Mitochondrial biogenesis [BR:
ppht03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
GA004_14985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
SYY_C-terminal
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
QXD31610
LinkDB
All DBs
Position
3451313..3452596
Genome browser
AA seq
427 aa
AA seq
DB search
MTILEDLHWRGLLNDCTAEEALADRLADGPISLYSGFDPTADSLHVGNLVPLIALRRFQN
YGHRPIALAGGATGSIGDPSGKKSERQLLTKEVLDHNIESVKTQLASILDFNEAIVNTAR
LVDNATWMAPISFLDFLRDVGKYFTVNSMVAKESVRARMEDRDVGISYTEFSYMLLQGYD
FYHLYQSENCELQIGGSDQWGNITIGTELTRKKAGGTVYGLTLPLITNADGTKFGKSESG
AIWLDPARTSVYRFYQYFINVDDRDVIRYLKYFTFLDQDEIAVLEKQHEENPGTRLAHRA
LAQEMTQLIHGEEATDDAIKASQILFGGGLEDISENALRAVANEIPDATVSSDTLSGEGL
SLLDALVESGLSPSRGQAKKDIQGGGVNVNNKRIQDLQSKLTSPDVHFDKYILLRRGKKN
YAALIVE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgacgattttggaagatctgcattggagaggactactgaacgactgcacagctgaagag
gctttagctgatcgacttgccgacgggcccatatcattgtatagtggctttgaccctact
gcagatagcctccatgtcggcaatctcgtgcctctcatagctcttaggcgtttccagaac
tatggtcacagaccaatcgctcttgccggcggagctactggaagcattggtgacccatcg
ggcaaaaagtctgagcgccagttactcactaaagaagtgctcgaccacaatatcgagtca
gtcaaaacgcagctcgccagtatactcgatttcaacgaagccatcgtaaataccgcccga
cttgtcgacaatgcaacttggatggccccaatcagctttctcgattttctaagagatgtt
ggcaaatatttcaccgtaaactccatggttgccaaagaaagcgtacgtgctcgcatggaa
gaccgtgatgtaggcatcagctacacagaattttcctacatgctgctgcaagggtacgac
ttctaccatctctaccagtcagaaaattgcgaactccaaatcggcggcagcgatcaatgg
ggaaacatcaccatcggtaccgagctgacacgcaaaaaggcggggggcactgtctacggc
ctcaccctacccctcatcactaacgctgacgggaccaaattcggcaagagtgaatcaggc
gccatttggctagaccctgctcgcaccagcgtgtatcgcttctaccagtacttcatcaat
gtcgatgatcgtgacgtcattcgctacttgaaatactttacttttctcgaccaggatgaa
atcgcggtactcgaaaaacagcacgaagaaaatcctggcacaagattagcccatcgagct
ctcgcccaagaaatgacgcagctcatccacggcgaagaggccaccgacgatgccatcaaa
gccagccagattctttttgggggtggtctcgaagacatttcggagaacgctttgcgagca
gtggccaacgaaataccggacgcaacggtatccagtgataccctttccggtgaaggactc
tctctactggacgctctcgtcgaatcaggcctgtccccatctcgtggccaggccaaaaaa
gatatccaaggcggaggtgtaaacgtgaacaataaacggatacaagatcttcaatcaaag
ctcacctcgcccgacgtccatttcgacaaatatatcctcctccgccgtggaaagaagaac
tacgcagctctgattgtggagtag
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