Candidatus Pelagisphaera phototrophica: GA004_15050
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Entry
GA004_15050 CDS
T09061
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
ppht
Candidatus Pelagisphaera phototrophica
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppht03036
]
GA004_15050 (smc)
Chromosome and associated proteins [BR:
ppht03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
GA004_15050 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
SMC_hinge
AAA_21
AAA_29
Cast
Laminin_II
UPF0242
DUF816
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QXD31622
LinkDB
All DBs
Position
complement(3465459..3469295)
Genome browser
AA seq
1278 aa
AA seq
DB search
MYLSSLKANGFKSFADSTHLHFEPGVTAVVGPNGCGKSNIADAIRWVLGEQSAKALRGGK
MQDVIFEGTDRRKPLNICEVSIILTDCEKELGQDFNEVELTRRVHRDGGSNYYINGKACR
LKDIQRLFMDTGVGRTSYSIMAQGQIDQILSSKPEERRAVFEEAAGISKYKAQRKEALNK
LAHVETNLDRVTDVISEINRQIGSLRRQATKAIRYKKLSYKLRHLDVGYSAYQYGTLNST
LDDIDKSAGSLQGEVDELQKDLENKDSSLTVYKEDRQSAIQKIQDAQQAVFDLRTMKEQI
ANESHMADIRITSMKERIEQAQEEIKSFETQIGEFATRLNEHSVDKQLHLDVLGNSDEIF
QERNRELAGIEAKLESSEREIQALRSQAQEAEQILHQSRDETSSLEVETGTSTSRLEQLK
KELAEQSEGQSQAQESLDTFNQGVLETETKRSELETAMEVAREKVSESRDAFRAAQVGIQ
ELDRTVAQKTARVKLLQQLQEKLEGYGEGAKALLKGKMGGDLGGQSFLPIASKLSVKNGY
GQAVEALLGSAVEAVAVGNADTVIEIFRQLKERKIGRVCMKLLNVGGSTGDGSDLPEWIA
PALDFISIGDENDALKSVLSASYVVADIAKFLKWWESHPDFRFLQIASKKGESVDSRGLV
TGGFKNAKNSSILQREIELKQTSKELEADQKSLQKSRDEAEKINKVLEKSEEAVESYRKD
LSETSQELSRLQAEVRNAEKTLNDQKQKAERLEREKSLLDETLFRALEKLETARSRSTSG
QEQLAESREKLEKVETSLAAIWAERDEKREALSQAKFDLQEKKQRLDMLEQGFVEIEQRR
SELTRLTESKTSDIAQWETQILEQQQVKGNAIERSESLDGELEESKQVVEETREALVSIE
DKVGILEKEQSYTREKVEGLRSNLNNQHIQIAEKRSRLEFVHEEIEREYGIDLRLVDWKF
EVWKARQPVENLPKLDLDASESEADEDLESKGGDTELAQETEVSNDSVEVEVSEDVEAEP
ASGPGAAVHKVPSEEELEELNATNWSKVKAEIKLLRKRVQGMGAVNTDAIEEYGELRERH
LFLKTQCDDLITSRDKLVAAIEEINLKSREQFSETFSQIQANFKHTFETLFGGGKADLKL
IEAEDVLESGIDIVAQPPGTRLKNITLLSGGQRTMTAVGLLFAIYMVKPSPFCLLDELDA
PLDESNIGRFTGLLKQFTSQSQFIIITHNKRTIQAAKAIYGVTMEEKGVSKVVSMKFNSE
HDDPDIVSLQLEKEAVPA
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgagctccctaaaagcaaacggcttcaaaagttttgccgactctacccatctt
cattttgaaccgggcgtgaccgctgtggtcggacccaatggatgtggcaaaagcaatatt
gcggacgcaatccgttgggttttgggtgagcaaagcgccaaggcattgcgaggagggaag
atgcaggacgtcattttcgaaggaacggacagacgcaaaccactgaatatttgcgaggtc
tcgatcattcttacggactgtgagaaagagttggggcaggatttcaatgaggtcgagctc
acgcgacgggtgcatcgcgatggaggaagcaactactacatcaacggcaaggcttgtcgg
ttaaaggacattcagcggcttttcatggatacgggtgttggtcggacttcctattcgatc
atggcccaaggtcagattgaccaaattctttcgtccaaacctgaggaacgccgagcggta
tttgaagaggcggcgggaatatcgaagtacaaagcccaacgaaaagaggccctcaacaag
cttgcccatgtagaaacgaatttggatcgcgtcacggacgtaatatccgaaatcaatcgc
cagatcgggagtctccgacggcaagcgactaaggcgattcgctacaagaagcttagctac
aagctgcgtcatctagatgttggatacagcgcttaccaatatggcacattgaactccact
ttggacgacatcgacaagagcgctgggagtctgcaaggagaggttgacgagcttcagaag
gacttggaaaacaaggattccagtctgactgtctacaaagaggatcgccagtccgcgatc
cagaagattcaagatgcgcagcaggcggtttttgatcttcgtaccatgaaggagcaaatt
gcgaacgagtcccacatggcggacattcggatcacttccatgaaggagcgaatcgaacag
gcccaagaggaaattaagtcttttgagactcagataggggagtttgcgacacggctaaat
gaacactcggtcgacaaacagcttcatttggatgtgcttggaaattcggatgaaatcttc
caagagcgtaatcgcgaactggcgggcattgaggctaagctcgaatcttctgagcgagaa
atccaagcgctgagatctcaagctcaggaggcggagcagatcttgcatcagagtcgtgac
gagacatccagcctcgaagttgaaacgggaaccagcaccagccgtctagagcagctcaag
aaagagctcgctgagcaaagtgagggacaatctcaggctcaggagtctttggatacgttc
aatcaaggagttttagaaacagagacgaagcgctccgaattggaaacggctatggaggtc
gccagagaaaaggtgtccgaatcaagggatgcgttccgagcagctcaagtcgggattcag
gagctggatcgcacggttgcccaaaagactgcccgcgtaaaactgctacagcagttgcag
gagaagctggaaggctatggagaaggagccaaagctcttttgaagggaaagatgggaggc
gatttgggagggcaatcctttttgcctattgcgtccaagttgtcagtaaagaatggatat
ggacaagcggttgaagcgcttctcgggtctgcggtagaggcggtcgcggttggcaatgcg
gatactgttattgaaattttccgtcaactaaaggagcggaaaattgggcgggtttgtatg
aagctgcttaatgttggaggatcgacaggagatggttccgacttacccgaatggatagcg
cccgctttggatttcatttccattggagatgaaaacgacgctcttaaatccgtcttgtcg
gcgagttacgtggtagcagatatcgcgaagttccttaagtggtgggagtcgcatcccgat
tttcggtttctgcaaatcgcttctaaaaagggtgagtcagtagatagtcgaggtctcgtc
accggcggctttaagaacgctaagaactcgagtattctccagcgagagatcgagctgaag
caaacgtcgaaggagctcgaggcggatcagaaatccctgcagaagtcccgtgacgaagcg
gaaaagatcaacaaagttttggagaaatccgaggaggcggttgagtcgtatcgcaaagat
ttgagtgaaacaagccaggagctttcgcgactgcaggcagaagttcgtaacgcggaaaaa
acgctcaacgatcagaagcagaaggcggagcgccttgagcgagagaagtcgctcttggat
gaaacgctttttcgcgctttggaaaaactggaaacggcccgttcacgatcaacgagtgga
caggagcagcttgctgaatcccgggagaagctcgaaaaggtggaaaccagtctagcagcc
atttgggcggaacgggatgaaaagcgtgaagcgctttcccaggcgaaattcgatttgcag
gaaaagaagcaaaggctggatatgctcgagcagggttttgttgaaattgagcaacgtcga
tctgagctgactcgattgacggaatccaagacctcggacattgcccagtgggaaactcaa
attttagagcagcagcaagtcaaggggaacgcaattgagcgtagtgaatccttagatggc
gagctagaggaatccaagcaggttgttgaggaaacccgggaagcgctggtttcgatcgag
gacaaggttggaattctggagaaggaacagtcttatacccgtgagaaggtagagggactt
cgttcgaatctgaacaaccagcatattcaaatcgcggaaaaacggtcccgactggagttc
gtccacgaggaaattgagcgggagtatggaattgatcttcgcttggttgactggaagttt
gaggtttggaaagcgaggcagccagttgagaacctgcctaaattggatctggatgcttca
gaatctgaggcggacgaagacctagagagcaagggtggtgataccgagctggcacaggag
actgaggtaagcaatgatagcgtagaagtagaggtatcggaagacgtcgaggcggagcct
gcttcggggcctggtgctgcggttcataaagtgccgtctgaggaagagctggaagaactg
aatgcgacgaattggagcaaggtgaaggcagagattaagttgctgcgtaaacgtgtccaa
ggtatgggagcggtgaatacggatgcgattgaggaatatggggagctgcgtgagcgtcac
ctgttccttaaaacgcagtgtgatgatctaatcacatcacgcgacaaactggttgcggca
attgaggaaatcaacctgaaatcacgagagcagttctccgaaacattcagccagattcag
gccaattttaagcacacgttcgaaaccctttttggaggaggaaaagcggatctaaagctg
attgaggctgaggatgtattggagagcggtattgatatcgtagcccaacccccgggtact
cgtttgaagaacattaccctcctttctggtggacagaggacgatgactgcggtcggattg
ctctttgccatctacatggtgaagcccagccccttctgcctactggacgagctggacgct
ccgctagatgaatcgaacatcgggcgctttacgggtctgcttaagcagttcacgtcccag
tcacagttcatcattataactcataacaaacgcacgatccaagcagccaaagcgatatac
ggagtgacgatggaagaaaagggcgtttcgaaggtggtatcgatgaagttcaattccgaa
cacgacgatccagatatcgtaagcctgcagttggaaaaagaggcggtgccggcgtaa
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