Candidatus Pelagisphaera phototrophica: GA004_15355
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Entry
GA004_15355 CDS
T09061
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GA004_15355 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppht03032
]
GA004_15355 (dnaB)
Enzymes [BR:
ppht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
GA004_15355 (dnaB)
DNA replication proteins [BR:
ppht03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GA004_15355 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QXD31678
LinkDB
All DBs
Position
complement(3539236..3540636)
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AA seq
466 aa
AA seq
DB search
MPFKPSSTETPNAPVDLVTAGRTLPHSIDAEKGLLAACLIDPAEVISRCLSMKLPREAFY
SQAHQTIYNTCVEVFETKSILDAKVLAEELNTRGQLNEVGGPVYVAELATQIETTAHASY
FLDIVREKYLLRRLIYTATKTVKSCFEPQLDGGLENFIDDIEKEIFAISDDRVADTSQPI
KKSVDDAVKLVQKLIAGRGELAGLSSGFDDLDKMTFGLHSQEMMVLAARPSMGKTSLAMN
IAEAVALPMKPGRQSAGVLIFSLEMSAEQLAMRLLTSRAKVSSQRLREGFVNKEEQQELA
QAAKELKNARLWIDDSGHVTINQLRAKARRIWARNDNMGLIVIDYLQLLTGTDPKIQREQ
QISEISRGLKTLAKELNVPVIVLSQLNRDSEKEKRQPKLSDLRESGSIEQDADVVLLLAR
PKDAGDEHSVAADTADLIIAKQRNGPVGEIKLTFRKEYTRFENHTE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttaagccttcgagcaccgaaacgccaaacgcccccgtcgatttagtaacggct
gggcggactttgcctcacagtatcgacgctgaaaaaggtttgcttgcagcttgtctgata
gatccagcggaagtcatctctcggtgtctctcgatgaagttgcctcgagaggcattctac
agccaggcccatcagaccatttacaatacctgcgtcgaagtattcgaaacaaagtcgata
ctcgatgccaaagtgctggcggaagagctcaatactcgcggacagttgaacgaggtcggt
gggcctgtttatgtggccgaactcgccacccaaattgagacgactgctcacgcttcctac
tttctcgacattgttcgagagaaataccttttgcggcggctgatttacacggctaccaaa
accgtaaagagctgctttgaaccgcaactcgatgggggcttggaaaactttatcgacgat
atcgaaaaggagatattcgcgatcagcgatgaccgagttgccgatacatcccagccgatt
aagaaatcggtcgatgatgccgtgaagctggttcagaagcttatcgcgggacgcggtgaa
ttggcggggctgtcgtccgggttcgacgaccttgataagatgacctttgggctccattcc
caggaaatgatggttctggccgctcgtccttcgatgggtaagacaagcctggcgatgaac
attgctgaagcggttgcgttgccgatgaagcccgggaggcaaagtgccggcgttctcatc
ttcagtttggaaatgagcgcggagcagcttgccatgcgtttgctgaccagtcgggcgaaa
gtgagttcgcaacgattgcgggaaggcttcgtgaataaggaggagcaacaagagttagct
caagcggcaaaggagctcaagaacgcccgtttgtggattgacgattcggggcatgtgacg
atcaatcagttgcgagcgaaagcccgccgcatctgggctcgcaacgataatatgggtttg
attgtgatcgactatcttcagctcctcaccggaacggaccctaaaattcagcgcgagcag
caaatttctgaaatttctcgaggattaaaaacccttgccaaggaactcaacgttcctgtg
attgtactaagtcagctaaaccgtgattccgagaaagaaaaacgacaaccgaaactctca
gacctccgcgaatcgggatccattgagcaagatgctgatgtggtcttgcttttggctcga
cctaaagacgcgggtgacgagcattcggtagcagccgacacagccgacctaatcatcgcc
aagcaacgaaatggtccggttggggaaattaaattaaccttccgaaaagaatacactcgc
tttgaaaaccacacggaatag
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